RNA–Protein interactions for RNA: ENST00000302979.4

POLR1D-201, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR1D, Length 1,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-201ENST00000302979 SYCP3Q8IZU3 236 aa28.66■■■□□ 2.18
POLR1D-201ENST00000302979 SPPL3Q8TCT6 385 aa28.66■■■□□ 2.18
POLR1D-201ENST00000302979 BCL7CQ8WUZ0 217 aaPredicted RBP28.66■■■□□ 2.18
POLR1D-201ENST00000302979 PPP1R10Q96QC0 940 aaKnown RBP28.66■■■□□ 2.18
POLR1D-201ENST00000302979 CNTN3Q9P232 1028 aa28.66■■■□□ 2.18
POLR1D-201ENST00000302979 CPSF3Q9UKF6 684 aaKnown RBP28.66■■■□□ 2.18
POLR1D-201ENST00000302979 MTCH2Q9Y6C9 303 aa28.66■■■□□ 2.18
POLR1D-201ENST00000302979 TGFB1I1O43294 461 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 CLTAP09496 248 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 DNAJB1P25685 340 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 PPM1AP35813 382 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 PLCB3Q01970 1234 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 CAMK1Q14012 370 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 NELFCDQ8IXH7 590 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 SPATA20Q8TB22 786 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 POMGNT1Q8WZA1 660 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 ERCC4Q92889 916 aaPredicted RBP28.65■■■□□ 2.18
POLR1D-201ENST00000302979 ZMAT2Q96NC0 199 aaKnown RBP28.65■■■□□ 2.18
POLR1D-201ENST00000302979 CBWD1Q9BRT8 395 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 AGO2Q9UKV8 859 aaKnown RBP28.65■■■□□ 2.18
POLR1D-201ENST00000302979 STXBP5LQ9Y2K9 1186 aa28.65■■■□□ 2.18
POLR1D-201ENST00000302979 THP07101 528 aa28.64■■■□□ 2.18
POLR1D-201ENST00000302979 GARTP22102 1010 aa28.64■■■□□ 2.18
POLR1D-201ENST00000302979 ALDH7A1P49419 539 aaKnown RBP28.64■■■□□ 2.18
POLR1D-201ENST00000302979 ENOX2Q16206 610 aaKnown RBP28.64■■■□□ 2.18
POLR1D-201ENST00000302979 ZSWIM2Q8NEG5 633 aa28.64■■■□□ 2.18
POLR1D-201ENST00000302979 GBP4Q96PP9 640 aa28.64■■■□□ 2.18
POLR1D-201ENST00000302979 FAM193BQ96PV7 902 aaPredicted RBP28.64■■■□□ 2.18
POLR1D-201ENST00000302979 LMBRD1Q9NUN5 540 aa28.64■■■□□ 2.18
POLR1D-201ENST00000302979 MARCH5Q9NX47 278 aa28.64■■■□□ 2.18
POLR1D-201ENST00000302979 SPG21Q9NZD8 308 aa28.64■■■□□ 2.18
POLR1D-201ENST00000302979 CACNG4Q9UBN1 327 aa28.64■■■□□ 2.18
POLR1D-201ENST00000302979 SMIM28A0A1B0GU29 152 aa28.63■■■□□ 2.17
POLR1D-201ENST00000302979 TTC26A0AVF1 554 aa28.63■■■□□ 2.17
POLR1D-201ENST00000302979 KCNE1P15382 129 aa28.63■■■□□ 2.17
POLR1D-201ENST00000302979 IGFBP4P22692 258 aa28.63■■■□□ 2.17
POLR1D-201ENST00000302979 TUSC3Q13454 348 aa28.63■■■□□ 2.17
POLR1D-201ENST00000302979 KYAT1Q16773 422 aa28.63■■■□□ 2.17
POLR1D-201ENST00000302979 CRELD2Q6UXH1 353 aaPredicted RBP28.63■■■□□ 2.17
POLR1D-201ENST00000302979 MRPL38Q96DV4 380 aaKnown RBP28.63■■■□□ 2.17
POLR1D-201ENST00000302979 LMAN2LQ9H0V9 348 aa28.63■■■□□ 2.17
POLR1D-201ENST00000302979 COL6A3P12111 3177 aa28.63■■■□□ 2.17
POLR1D-201ENST00000302979 PRRC2BQ5JSZ5 2229 aaKnown RBP28.62■■■□□ 2.17
POLR1D-201ENST00000302979 NRP1O14786 923 aa28.62■■■□□ 2.17
POLR1D-201ENST00000302979 ADRB2P07550 413 aa28.62■■■□□ 2.17
POLR1D-201ENST00000302979 ACOT2P49753 483 aa28.62■■■□□ 2.17
POLR1D-201ENST00000302979 POF1BQ8WVV4 589 aa28.62■■■□□ 2.17
POLR1D-201ENST00000302979 CCDC47Q96A33 483 aaKnown RBP28.62■■■□□ 2.17
POLR1D-201ENST00000302979 IGSF21Q96ID5 467 aa28.62■■■□□ 2.17
POLR1D-201ENST00000302979 PAAF1Q9BRP4 392 aa28.62■■■□□ 2.17
POLR1D-201ENST00000302979 LMCD1Q9NZU5 365 aa28.62■■■□□ 2.17
POLR1D-201ENST00000302979 PCDHA5Q9Y5H7 936 aa28.62■■■□□ 2.17
POLR1D-201ENST00000302979 CARNS1A5YM72 827 aa28.61■■■□□ 2.17
POLR1D-201ENST00000302979 F8W810 466 aa28.61■■■□□ 2.17
POLR1D-201ENST00000302979 UBE3AQ05086 875 aa28.61■■■□□ 2.17
POLR1D-201ENST00000302979 SOX4Q06945 474 aaPredicted RBP28.61■■■□□ 2.17
POLR1D-201ENST00000302979 KNOP1Q1ED39 458 aaKnown RBP28.61■■■□□ 2.17
POLR1D-201ENST00000302979 ARMCX5Q6P1M9 558 aa28.61■■■□□ 2.17
POLR1D-201ENST00000302979 SAAL1Q96ER3 474 aa28.61■■■□□ 2.17
POLR1D-201ENST00000302979 PLEKHA5Q9HAU0 1116 aa28.61■■■□□ 2.17
POLR1D-201ENST00000302979 AGPAT3Q9NRZ7 376 aa28.61■■■□□ 2.17
POLR1D-201ENST00000302979 LZTS1Q9Y250 596 aa28.61■■■□□ 2.17
POLR1D-201ENST00000302979 PRG3Q9Y2Y8 225 aaPredicted RBP28.61■■■□□ 2.17
POLR1D-201ENST00000302979 CASTOR2A6NHX0 329 aa28.6■■■□□ 2.17
POLR1D-201ENST00000302979 OR1G1P47890 313 aa28.6■■■□□ 2.17
POLR1D-201ENST00000302979 GSDMAQ96QA5 445 aa28.6■■■□□ 2.17
POLR1D-201ENST00000302979 VN1R3Q9BXE9 311 aa28.6■■■□□ 2.17
POLR1D-201ENST00000302979 KCTD10Q9H3F6 313 aa28.6■■■□□ 2.17
POLR1D-201ENST00000302979 RPF1Q9H9Y2 349 aaKnown RBP28.6■■■□□ 2.17
POLR1D-201ENST00000302979 HOOK1Q9UJC3 728 aaKnown RBP28.6■■■□□ 2.17
POLR1D-201ENST00000302979 FAN1Q9Y2M0 1017 aa28.6■■■□□ 2.17
POLR1D-201ENST00000302979 ALDH2P05091 517 aa28.59■■■□□ 2.17
POLR1D-201ENST00000302979 PPP2R3AQ06190 1150 aa28.59■■■□□ 2.17
POLR1D-201ENST00000302979 RABGGTAQ92696 567 aa28.59■■■□□ 2.17
POLR1D-201ENST00000302979 TMEM169Q96HH4 297 aa28.59■■■□□ 2.17
POLR1D-201ENST00000302979 PCIF1Q9H4Z3 704 aa28.59■■■□□ 2.17
POLR1D-201ENST00000302979 GOLGA2P5Q9HBQ8 144 aa28.59■■■□□ 2.17
POLR1D-201ENST00000302979 LACTBL1A8MY62 500 aa28.58■■■□□ 2.17
POLR1D-201ENST00000302979 CSPG5O95196 566 aa28.58■■■□□ 2.17
POLR1D-201ENST00000302979 EFEMP2O95967 443 aa28.58■■■□□ 2.17
POLR1D-201ENST00000302979 IRS1P35568 1242 aa28.58■■■□□ 2.17
POLR1D-201ENST00000302979 PTPROQ16827 1216 aa28.58■■■□□ 2.17
POLR1D-201ENST00000302979 SMARCE1Q969G3 411 aa28.58■■■□□ 2.17
POLR1D-201ENST00000302979 C18orf25Q96B23 403 aaPredicted RBP28.58■■■□□ 2.17
POLR1D-201ENST00000302979 FAM213AQ9BRX8 229 aa28.58■■■□□ 2.17
POLR1D-201ENST00000302979 RMND1Q9NWS8 449 aa28.58■■■□□ 2.17
POLR1D-201ENST00000302979 GOLGA8IPA6NC78 632 aa28.57■■■□□ 2.16
POLR1D-201ENST00000302979 GOLGA8JA6NMD2 632 aa28.57■■■□□ 2.16
POLR1D-201ENST00000302979 KIAA0391O15091 583 aaKnown RBP28.57■■■□□ 2.16
POLR1D-201ENST00000302979 EXTL3O43909 919 aa28.57■■■□□ 2.16
POLR1D-201ENST00000302979 SMC2O95347 1197 aa28.57■■■□□ 2.16
POLR1D-201ENST00000302979 WNT7BP56706 349 aa28.57■■■□□ 2.16
POLR1D-201ENST00000302979 SNRPFP62306 86 aaKnown RBP28.57■■■□□ 2.16
POLR1D-201ENST00000302979 POU5F1Q01860 360 aaKnown RBP28.57■■■□□ 2.16
POLR1D-201ENST00000302979 SPAG1Q07617 926 aa28.57■■■□□ 2.16
POLR1D-201ENST00000302979 ZBTB6Q15916 424 aa28.57■■■□□ 2.16
POLR1D-201ENST00000302979 C12orf56Q8IXR9 622 aa28.57■■■□□ 2.16
POLR1D-201ENST00000302979 SMYD4Q8IYR2 804 aaPredicted RBP28.57■■■□□ 2.16
POLR1D-201ENST00000302979 RNF168Q8IYW5 571 aaPredicted RBP28.57■■■□□ 2.16
POLR1D-201ENST00000302979 TLR9Q9NR96 1032 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms