RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 WNT7BP56706 349 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 IFI35P80217 286 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-204ENST00000300862 CYP24A1Q07973 514 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 CYFIP1Q7L576 1253 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 SAMD7Q7Z3H4 446 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 TMEM174Q8WUU8 243 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 CPA5Q8WXQ8 436 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
HIF3A-204ENST00000300862 PCDHA3Q9Y5H8 950 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 LOXHD1Q8IVV2 1947 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 MAPK13O15264 365 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 SFNP31947 248 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 COILP38432 576 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-204ENST00000300862 GHRHRQ02643 423 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 SIX1Q15475 284 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-204ENST00000300862 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 ZKSCAN4Q969J2 545 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-204ENST00000300862 VTI1AQ96AJ9 217 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 AZI2Q9H6S1 392 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-204ENST00000300862 PCYOX1Q9UHG3 505 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 DDX20Q9UHI6 824 aaKnown RBP13.81□□□□□ -0.2
HIF3A-204ENST00000300862 ANAPC7Q9UJX3 599 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 GTF3C4Q9UKN8 822 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 PSME4Q14997 1843 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 RGS20O76081 388 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 ACTN3Q08043 901 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-204ENST00000300862 NBPF12Q5TAG4 269 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-204ENST00000300862 CIAPIN1Q6FI81 312 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 MICALCLQ6ZW33 695 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 CCDC13Q8IYE1 715 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 EPS8L3Q8TE67 593 aaKnown RBP13.81□□□□□ -0.2
HIF3A-204ENST00000300862 ZNF516Q92618 1163 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 XPNPEP1Q9NQW7 623 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 COQ4Q9Y3A0 265 aa13.81□□□□□ -0.2
HIF3A-204ENST00000300862 MTA2O94776 668 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 PSEN1P49768 467 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 RWDD2BP57060 319 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 TCEAL1Q15170 157 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 TRIP13Q15645 432 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-204ENST00000300862 SNRNP48Q6IEG0 339 aaKnown RBP13.8□□□□□ -0.2
HIF3A-204ENST00000300862 ACAD10Q6JQN1 1059 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 C6orf89Q6UWU4 347 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 TAS1R3Q7RTX0 852 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 CCDC60Q8IWA6 550 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-204ENST00000300862 TLCD1Q96CP7 247 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 MFSD14AQ96MC6 490 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 FAM118BQ9BPY3 351 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 HERPUD2Q9BSE4 406 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 TIPINQ9BVW5 301 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 DNAJC17Q9NVM6 304 aaKnown RBP13.8□□□□□ -0.2
HIF3A-204ENST00000300862 PMM2O15305 246 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 STBD1O95210 358 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 CFHP08603 1231 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 ACOT2P49753 483 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 DRG2P55039 364 aaKnown RBP13.8□□□□□ -0.2
HIF3A-204ENST00000300862 EIF3BP55884 814 aaKnown RBP13.8□□□□□ -0.2
HIF3A-204ENST00000300862 CCDC38Q502W7 563 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.8□□□□□ -0.2
HIF3A-204ENST00000300862 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
HIF3A-204ENST00000300862 O00370 1275 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 RASSF9O75901 435 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 HSPA6P17066 643 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 RRM1P23921 792 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 MAPK4P31152 587 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 SNRPFP62306 86 aaKnown RBP13.79□□□□□ -0.2
HIF3A-204ENST00000300862 PPP1R7Q15435 360 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 SPRED3Q2MJR0 410 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 MTERF2Q49AM1 385 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 OTUD6AQ7L8S5 288 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 HOOK3Q86VS8 718 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 PASD1Q8IV76 773 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 GPD1LQ8N335 351 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 PSPC1Q8WXF1 523 aaKnown RBP13.79□□□□□ -0.2
HIF3A-204ENST00000300862 KIFAP3Q92845 792 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 FBXL18Q96ME1 805 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 CHST7Q9NS84 486 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 ZNFX1Q9P2E3 1918 aaKnown RBP13.79□□□□□ -0.2
HIF3A-204ENST00000300862 PODXLO00592 558 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 CTNND1O60716 968 aaKnown RBP13.79□□□□□ -0.2
HIF3A-204ENST00000300862 NUDT17P0C025 328 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 CHN1P15882 459 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 KCNA2P16389 499 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 SCP2P22307 547 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 CCND2P30279 289 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 VPS41P49754 854 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 PRKCEQ02156 737 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 CLUL1Q15846 466 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 CLEC16AQ2KHT3 1053 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 ZNF772Q68DY9 489 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-204ENST00000300862 SCARA3Q6AZY7 606 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 TMC2Q8TDI7 906 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 TMEM143Q96AN5 459 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 NTPCRQ9BSD7 190 aaKnown RBP13.79□□□□□ -0.2
HIF3A-204ENST00000300862 CCDC113Q9H0I3 377 aa13.79□□□□□ -0.2
HIF3A-204ENST00000300862 POLR3FQ9H1D9 316 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-204ENST00000300862 UVRAGQ9P2Y5 699 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms