RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ACAD9Q9H845 621 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 V9GYQ6 96 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ACAP3Q96P50 834 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 KRT7P08729 469 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 IFNA8P32881 189 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 METTL16Q86W50 562 aaKnown RBP14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SPATA2LQ8IUW3 424 aaPredicted RBP14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 C4orf33Q8N1A6 199 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MAGEB5Q9BZ81 275 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 AGAP1Q9UPQ3 857 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PVALEFA0A1B0GWK0 134 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MAGEA9P43362 315 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SMTNL2Q2TAL5 461 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 WDR72Q3MJ13 1102 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 C2orf40Q9H1Z8 148 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 NARFQ9UHQ1 456 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ZNF521Q96K83 1311 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 DGKIO75912 1065 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ZC2HC1CQ53FD0 456 aaPredicted RBP14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PPHLN1Q8NEY8 458 aaKnown RBP14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 BPIFA3Q9BQP9 254 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RUBCNLQ9H714 662 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MAD2L2Q9UI95 211 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TTC37Q6PGP7 1564 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PYGLP06737 847 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RARBP10826 455 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 GFAPP14136 432 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SFNP31947 248 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 VSNL1P62760 191 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CAV1Q03135 178 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 HIF1AQ16665 826 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 NDE1Q9NXR1 346 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TJP2Q9UDY2 1190 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 LZTS1Q9Y250 596 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ZC3H4Q9UPT8 1303 aaKnown RBP14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CDK12Q9NYV4 1490 aaPredicted RBP14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TLR2O60603 784 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ETFBP38117 255 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PPP3CCP48454 512 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ADCK2Q7Z695 626 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 KIFC3Q9BVG8 833 aa14.32□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CYP19A1P11511 503 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 EPC2Q52LR7 807 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ATP11CQ8NB49 1132 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FAM84BQ96KN1 310 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 KLF6Q99612 283 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 IL1RL2Q9HB29 575 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SNX9Q9Y5X1 595 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 GRID2IPA4D2P6 1211 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 APRTP07741 180 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TXNP10599 105 aaKnown RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 LRRC74AQ0VAA2 488 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 UBA3Q8TBC4 463 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 JPH1Q9HDC5 661 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 AGPAT5Q9NUQ2 364 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PCMTD2Q9NV79 361 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 XPO7Q9UIA9 1087 aaKnown RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MYBL1P10243 752 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SLC9A5Q14940 896 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ITPRIPL1Q6GPH6 555 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 BRINP3Q76B58 766 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PI4K2AQ9BTU6 479 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CHCHD3Q9NX63 227 aaKnown RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SPDYE5A6NIY4 337 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 EN1Q05925 392 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 DUOXA2Q1HG44 320 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SPDYE7PQ495Y7 208 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 EPAS1Q99814 870 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FBXO40Q9UH90 709 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SPATA31E1Q6ZUB1 1445 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MYO1GB0I1T2 1018 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CHN1P15882 459 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 NFKBIAP25963 317 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 GJB7Q6PEY0 223 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MMS22LQ6ZRQ5 1243 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 BHMTQ93088 406 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FAM49BQ9NUQ9 324 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SENP1Q9P0U3 644 aa14.31□□□□□ -0.12
CHRFAM7A-201ENST00000299847 VCAM1P19320 739 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CSE1LP55060 971 aaKnown RBP14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 REEP2Q9BRK0 252 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ASPSCR1Q9BZE9 553 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TRABDQ9H4I3 376 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RPAP1Q9BWH6 1393 aaPredicted RBP14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ABHD8Q96I13 439 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SEPT5Q99719 369 aaPredicted RBP14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 A0A0G2JLW4 131 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RTN2O75298 545 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ATP2C1P98194 919 aaPredicted RBP14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PDAP1Q13442 181 aaKnown RBP14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 DMC1Q14565 340 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CYP4A22Q5TCH4 519 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 LONP2Q86WA8 852 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RFFLQ8WZ73 363 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 GOLPH3Q9H4A6 298 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 DYRK4Q9NR20 520 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 AFF2P51816 1311 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms