RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SYT2Q8N9I0 419 aaPredicted RBP23.08■■□□□ 1.29
SMCO4-201ENST00000298966 FEZF2Q8TBJ5 459 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 ANP32BQ92688 251 aaKnown RBP23.08■■□□□ 1.29
SMCO4-201ENST00000298966 LPPQ93052 612 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 CBX8Q9HC52 389 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 TBC1D13Q9NVG8 400 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 INPP5FQ9Y2H2 1132 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 QARSP47897 775 aaKnown RBP23.07■■□□□ 1.28
SMCO4-201ENST00000298966 CDC42EP1Q00587 391 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 PRKCEQ02156 737 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 CUL4BQ13620 913 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 MCM6Q14566 821 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 ECM1Q16610 540 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 NOMO2Q5JPE7 1267 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 C15orf39Q6ZRI6 1047 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 DGLUCYQ7Z3D6 616 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 C4orf19Q8IY42 314 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 BCL7CQ8WUZ0 217 aaPredicted RBP23.07■■□□□ 1.28
SMCO4-201ENST00000298966 RMDN1Q96DB5 314 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 DYDC2Q96IM9 177 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 KLHL5Q96PQ7 755 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 TRAIPQ9BWF2 469 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 GBP3Q9H0R5 595 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 WNT16Q9UBV4 365 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 STK39Q9UEW8 545 aa23.07■■□□□ 1.28
SMCO4-201ENST00000298966 ZNF862O60290 1169 aa23.06■■□□□ 1.28
SMCO4-201ENST00000298966 CSDE1O75534 798 aaKnown RBP23.06■■□□□ 1.28
SMCO4-201ENST00000298966 RHOBTB3O94955 611 aa23.06■■□□□ 1.28
SMCO4-201ENST00000298966 SFPQP23246 707 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMCO4-201ENST00000298966 PSMC5P62195 406 aa23.06■■□□□ 1.28
SMCO4-201ENST00000298966 ZNF658Q5TYW1 1059 aaPredicted RBP23.06■■□□□ 1.28
SMCO4-201ENST00000298966 POTEGQ6S5H5 508 aa23.06■■□□□ 1.28
SMCO4-201ENST00000298966 C11orf57Q6ZUT1 292 aaPredicted RBP23.06■■□□□ 1.28
SMCO4-201ENST00000298966 UNC13DQ70J99 1090 aa23.06■■□□□ 1.28
SMCO4-201ENST00000298966 TPH2Q8IWU9 490 aa23.06■■□□□ 1.28
SMCO4-201ENST00000298966 LRRC15Q8TF66 581 aa23.06■■□□□ 1.28
SMCO4-201ENST00000298966 LXNQ9BS40 222 aa23.06■■□□□ 1.28
SMCO4-201ENST00000298966 BIN1O00499 593 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 NARSO43776 548 aaKnown RBP23.05■■□□□ 1.28
SMCO4-201ENST00000298966 CFHP08603 1231 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 SLC11A1P49279 550 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 CLCN4P51793 760 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 SLC12A3P55017 1021 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 ASIC1P78348 528 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 CYP4A11Q02928 519 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 PSMD2Q13200 908 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 DPCR1Q3MIW9 517 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 KCNK18Q7Z418 384 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 RGL1Q9NZL6 768 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 DNAJB4Q9UDY4 337 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 PIN4Q9Y237 131 aaKnown RBP23.05■■□□□ 1.28
SMCO4-201ENST00000298966 CEP250Q9BV73 2442 aa23.05■■□□□ 1.28
SMCO4-201ENST00000298966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-201ENST00000298966 MED19A0JLT2 244 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-201ENST00000298966 SMTNL1A8MU46 457 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 E9PMD0 336 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 SSBP05455 408 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMCO4-201ENST00000298966 CNPP09543 421 aaKnown RBP23.04■■□□□ 1.28
SMCO4-201ENST00000298966 ERCC5P28715 1186 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-201ENST00000298966 GBP2P32456 591 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-201ENST00000298966 RAB27AP51159 221 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 TPM4P67936 248 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 IQCB1Q15051 598 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 KIAA2013Q8IYS2 634 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 STAMQ92783 540 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 VN1R3Q9BXE9 311 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 INO80BQ9C086 356 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-201ENST00000298966 BLZF1Q9H2G9 400 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 FAM105AQ9NUU6 356 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 EXOC1Q9NV70 894 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 R4GN57 208 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 CACNA1BQ00975 2339 aa23.04■■□□□ 1.28
SMCO4-201ENST00000298966 OTOGLQ3ZCN5 2332 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 NCOR2Q9Y618 2525 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 DMXL1Q9Y485 3027 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 MYMKA6NI61 221 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 IKBKBO14920 756 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 OFD1O75665 1012 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 DNM2P50570 870 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 STIM1Q13586 685 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 CTTNQ14247 550 aaKnown RBP23.03■■□□□ 1.28
SMCO4-201ENST00000298966 COBLL1Q53SF7 1204 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 ELMSAN1Q6PJG2 1045 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 CCDC65Q8IXS2 484 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 URGCPQ8TCY9 931 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 DDX12PQ92771 950 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 PGBD4Q96DM1 585 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 HINFPQ9BQA5 517 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 TIPINQ9BVW5 301 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 MRPL17Q9NRX2 175 aaKnown RBP23.03■■□□□ 1.28
SMCO4-201ENST00000298966 ANKEF1Q9NU02 776 aa23.03■■□□□ 1.28
SMCO4-201ENST00000298966 A0A087WZ62 844 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 KRBA1A5PL33 1030 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 BECN2A8MW95 431 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 GOLGA6L19H0YKK7 550 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 KLRC4O43908 158 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 ZNF623O75123 536 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 CYP11B2P19099 503 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 DRP2Q13474 957 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 PUM1Q14671 1186 aaKnown RBP eCLIP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms