RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 NHEJ1Q9H9Q4 299 aaPredicted RBP20.03■□□□□ 0.8
SEC61A2-201ENST00000298428 RPF1Q9H9Y2 349 aaKnown RBP20.03■□□□□ 0.8
SEC61A2-201ENST00000298428 RAB20Q9NX57 234 aa20.03■□□□□ 0.8
SEC61A2-201ENST00000298428 PPP2R2CQ9Y2T4 447 aa20.03■□□□□ 0.8
SEC61A2-201ENST00000298428 FRMPD3Q5JV73 1810 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 ZSCAN12O43309 604 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 C4BPAP04003 597 aaKnown RBP20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 STAG3L1P0CL83 205 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 HOXA11P31270 313 aaPredicted RBP20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 PTGISQ16647 500 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 KYAT1Q16773 422 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 TDRD10Q5VZ19 366 aaKnown RBP20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 WDR49Q8IV35 697 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 TMEM192Q8IY95 271 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 STK33Q9BYT3 514 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 AIPL1Q9NZN9 384 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 ARHGAP20Q9P2F6 1191 aa20.02■□□□□ 0.8
SEC61A2-201ENST00000298428 BRCA2P51587 3418 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 RPLP2P05387 115 aaKnown RBP20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 CLTAP09496 248 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 CCDC175P0C221 793 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 CXCL8P10145 99 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 CLCN1P35523 988 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 C1QTNF8P60827 252 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 BIRC3Q13489 604 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 ASIC2Q16515 512 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 DCAF4L1Q3SXM0 396 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 NOTUMQ6P988 496 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 APBB1IPQ7Z5R6 666 aaPredicted RBP20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 CCDC170Q8IYT3 715 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 ARRDC4Q8NCT1 418 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 WNT8BQ93098 351 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 PPP1R13BQ96KQ4 1090 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 TRPV2Q9Y5S1 764 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 ADGRG1Q9Y653 693 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 CDY2AQ9Y6F7 541 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 EPN1Q9Y6I3 576 aaPredicted RBP20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 NDUFA10O95299 355 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 PLEKP08567 350 aaPredicted RBP20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 AXLP30530 894 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 CYLC1P35663 651 aaPredicted RBP20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 AP3M2P53677 418 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 ARID5AQ03989 594 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 SLC9C1Q4G0N8 1177 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 HGSNATQ68CP4 663 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 SLC27A1Q6PCB7 646 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 ARHGEF19Q8IW93 802 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 OR5B17Q8NGF7 314 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 CCDC42Q96M95 316 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 UNC93B1Q9H1C4 597 aa20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 UBE2TQ9NPD8 197 aaPredicted RBP20.01■□□□□ 0.79
SEC61A2-201ENST00000298428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.01■□□□□ 0.796e-6■■■■■ 48.1
SEC61A2-201ENST00000298428 DNAH12Q6ZR08 3092 aa20■□□□□ 0.79
SEC61A2-201ENST00000298428 F8VZ95 297 aa20■□□□□ 0.79
SEC61A2-201ENST00000298428 IL18RAPO95256 599 aa20■□□□□ 0.79
SEC61A2-201ENST00000298428 SERPING1P05155 500 aa20■□□□□ 0.79
SEC61A2-201ENST00000298428 PIK3CAP42336 1068 aa20■□□□□ 0.79
SEC61A2-201ENST00000298428 PTPN11Q06124 597 aaPredicted RBP20■□□□□ 0.79
SEC61A2-201ENST00000298428 DRAP1Q14919 205 aaPredicted RBP20■□□□□ 0.79
SEC61A2-201ENST00000298428 TDRD12Q587J7 1177 aaKnown RBP20■□□□□ 0.79
SEC61A2-201ENST00000298428 RPAINQ86UA6 219 aa20■□□□□ 0.79
SEC61A2-201ENST00000298428 CEP350Q5VT06 3117 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 A0A1W2PQ45 241 aaPredicted RBP19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 A0A1W2PQY0 241 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 NPTXRO95502 500 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 HLA-DRAP01903 254 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 CTSHP09668 335 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 STAT1P42224 750 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 POU5F1Q01860 360 aaKnown RBP19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 ARHGAP44Q17R89 818 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 ACRBPQ8NEB7 543 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 NT5C1BQ96P26 610 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 DEF6Q9H4E7 631 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 PIN4Q9Y237 131 aaKnown RBP19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 NOD1Q9Y239 953 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 B4GALT4O60513 344 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 ZC3H11AO75152 810 aaKnown RBP eCLIP19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 EIF4A3P38919 411 aaKnown RBP19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 KLHL30Q0D2K2 578 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 DUOXA2Q1HG44 320 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 PPM1KQ8N3J5 372 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 MTMR12Q9C0I1 747 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 GPR88Q9GZN0 384 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 STARD7Q9NQZ5 370 aa19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 TRMT13Q9NUP7 481 aaKnown RBP19.99■□□□□ 0.79
SEC61A2-201ENST00000298428 SSU72P8A0A1W2PR75 194 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 KBTBD13C9JR72 458 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 PHACTR2O75167 634 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 VNN1O95497 513 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 PNMA6AP0CW24 399 aaPredicted RBP19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 SOX5P35711 763 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 GRM5P41594 1212 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 TFAMQ00059 246 aaKnown RBP19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 MAPK8IP2Q13387 824 aaPredicted RBP19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 IRF2BP2Q7Z5L9 587 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 FMNL3Q8IVF7 1028 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 REXO1L1PQ8IX06 675 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 C16orf45Q96MC5 204 aaPredicted RBP19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 ACAP3Q96P50 834 aa19.98■□□□□ 0.79
SEC61A2-201ENST00000298428 PI4K2AQ9BTU6 479 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms