RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RRM1P23921 792 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 ADCY2Q08462 1091 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 MYBPC2Q14324 1141 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 E2F5Q15329 346 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 SPOPLQ6IQ16 392 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 FAM228AQ86W67 206 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 TMEM161BQ8NDZ6 487 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 DYDC1Q8WWB3 177 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 PSPC1Q8WXF1 523 aaKnown RBP26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 NT5C1BQ96P26 610 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 KCNK9Q9NPC2 374 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 ZNF277Q9NRM2 450 aaPredicted RBP26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 GTF3C4Q9UKN8 822 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 CCT8L1PA6NM43 557 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 GRIN3BO60391 1043 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 HSPA6P17066 643 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 FAM160B2Q86V87 743 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 DDX1Q92499 740 aaKnown RBP26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 ACTR5Q9H9F9 607 aaPredicted RBP26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 ABCF3Q9NUQ8 709 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 P4HA2O15460 535 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 PTGER2P43116 358 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 ANO5Q75V66 913 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 FAM213AQ9BRX8 229 aa26.09■■□□□ 1.77
SPTSSA-201ENST00000298130 AGTP01019 485 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 GH1P01241 217 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 CCDC50Q8IVM0 306 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 C3orf20Q8ND61 904 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 FBXL13Q8NEE6 735 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 KLHL11Q9NVR0 708 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 UBIAD1Q9Y5Z9 338 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 ADGRA3Q8IWK6 1321 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 SCP2P22307 547 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 HSPA1LP34931 641 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 ZKSCAN8Q15776 578 aaPredicted RBP26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 CNGA2Q16280 664 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 SWT1Q5T5J6 900 aaKnown RBP26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 PARP9Q8IXQ6 854 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 OGFOD1Q8N543 542 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 C7orf43Q8WVR3 580 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 ARHGEF2Q92974 986 aaKnown RBP26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 KMT5AQ9NQR1 393 aa26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 TPX2Q9ULW0 747 aaKnown RBP26.08■■□□□ 1.77
SPTSSA-201ENST00000298130 SSR1P43307 286 aaKnown RBP26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 SPDYCQ5MJ68 293 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 HIBCHQ6NVY1 386 aaPredicted RBP26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 TAOK3Q9H2K8 898 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 FGFR1OP2Q9NVK5 253 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 ITGA8P53708 1063 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 WNT7BP56706 349 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 SLMAPQ14BN4 828 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 CYP1B1Q16678 543 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 ACAD10Q6JQN1 1059 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 RSBN1LQ6PCB5 846 aaPredicted RBP26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 CENPTQ96BT3 561 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 WNK4Q96J92 1243 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 PARP2Q9UGN5 583 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 USTQ9Y2C2 406 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 NCKAP1LP55160 1127 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 C12orf56Q8IXR9 622 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 SAMD15Q9P1V8 674 aa26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 CNOT7Q9UIV1 285 aaKnown RBP26.07■■□□□ 1.76
SPTSSA-201ENST00000298130 TMEM120BA0PK00 339 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 DRP2Q13474 957 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 HP1BP3Q5SSJ5 553 aaPredicted RBP26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 CYP4X1Q8N118 509 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 BICD1Q96G01 975 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 RMDN3Q96TC7 470 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 TMEM8AQ9HCN3 771 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 TCP11X1B4DZS4 312 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 HNRNPDLO14979 420 aaKnown RBP26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 MTA2O94776 668 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 NF2P35240 595 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 DMP1Q13316 513 aaPredicted RBP26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 PGM5Q15124 567 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 SCARA3Q6AZY7 606 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 TBC1D1Q86TI0 1168 aaPredicted RBP26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 TCP11Q8WWU5 503 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 ADAM33Q9BZ11 813 aa26.06■■□□□ 1.76
SPTSSA-201ENST00000298130 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.06■■□□□ 1.761e-8■■□□□ 12.6
SPTSSA-201ENST00000298130 MPP2Q14168 576 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 PLCB4Q15147 1175 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 STYK1Q6J9G0 422 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 CEP170P1Q96L14 293 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 MROH7Q68CQ1 1323 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 GGPS1O95749 300 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 ADCY8P40145 1251 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 ALCAMQ13740 583 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 CLUL1Q15846 466 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 ARMC9Q7Z3E5 817 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 ANKS1BQ7Z6G8 1248 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 PIGWQ7Z7B1 504 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 ANKS4BQ8N8V4 417 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 TBC1D31Q96DN5 1066 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 C9orf72Q96LT7 481 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 AGAP1Q9UPQ3 857 aa26.05■■□□□ 1.76
SPTSSA-201ENST00000298130 CETPP11597 493 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 PSMC5P62195 406 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 SNCBQ16143 134 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms