RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 MAP3K6O95382 1288 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 KRT16P08779 473 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 POTEJP0CG39 1038 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 CACNA1SQ13698 1873 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 CNGA2Q16280 664 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 P3H1Q32P28 736 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 FMNL3Q8IVF7 1028 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 CDAN1Q8IWY9 1227 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 CTAGE3PQ8IX95 158 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 ZBED8Q8IZ13 594 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 LRRC8CQ8TDW0 803 aa14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 R3HDM2Q9Y2K5 976 aaKnown RBP14.19□□□□□ -0.14
TNFRSF21-201ENST00000296861 LRRD1A4D1F6 860 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 PPIP5K2O43314 1243 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 SNHG28P0DPA3 235 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 PLS3P13797 630 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 VCAM1P19320 739 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 SPIRE1Q08AE8 756 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 SNRNP35Q16560 246 aaKnown RBP14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 FAM228AQ86W67 206 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 LDHDQ86WU2 507 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 SCYL3Q8IZE3 742 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 RBM15Q96T37 977 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■□□□ 13.7
TNFRSF21-201ENST00000296861 NOP53Q9NZM5 478 aaKnown RBP14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 SAE1Q9UBE0 346 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 LRRIQ4A6NIV6 560 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 PIK3R2O00459 728 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 CYP3A4P08684 503 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 MSH2P43246 934 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 GPS1Q13098 491 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 CYP4X1Q8N118 509 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 OGFOD1Q8N543 542 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 LENG9Q96B70 501 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 ZWILCHQ9H900 591 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 NFIBO00712 420 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 NQO1P15559 274 aaKnown RBP14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 JAM2P57087 298 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 MXRA7P84157 204 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 SMTNL2Q2TAL5 461 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 BBS9Q3SYG4 887 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 NAIF1Q69YI7 327 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 RMDN2Q96LZ7 410 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 METTL5Q9NRN9 209 aaKnown RBP14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 KCNH7Q9NS40 1196 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 GRHL1Q9NZI5 618 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 PLCH1Q4KWH8 1693 aa14.18□□□□□ -0.14
TNFRSF21-201ENST00000296861 CBX6O95503 412 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 CYP11B1P15538 503 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 ATP5DP30049 168 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 CPA2P48052 419 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 MARSP56192 900 aaKnown RBP14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 MTERF2Q49AM1 385 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 EPS8L1Q8TE68 723 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 NPHS2Q9NP85 383 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 ADAM22Q9P0K1 906 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 NAALADL1Q9UQQ1 740 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 STXBP5LQ9Y2K9 1186 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 IKBKGQ9Y6K9 419 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 ZHX2Q9Y6X8 837 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 SNX3O60493 162 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 RARGP13631 454 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 PIK3CAP42336 1068 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 RAD23BP54727 409 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 IL9RQ01113 521 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 GNPTABQ3T906 1256 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 LONP2Q86WA8 852 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 RASGEF1CQ8N431 466 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 IL31RAQ8NI17 732 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 SEMA4DQ92854 862 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 ZDHHC18Q9NUE0 388 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 VAV3Q9UKW4 847 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 MRPL11Q9Y3B7 192 aaKnown RBP14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 ROBO3Q96MS0 1386 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 ECE2O60344 883 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 ADRB2P07550 413 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 DMP1Q13316 513 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 RCN2Q14257 317 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 ARHGEF18Q6ZSZ5 1173 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 FAM198AQ9UFP1 575 aa14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 SEPT9Q9UHD8 586 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF21-201ENST00000296861 CFAP69A5D8W1 941 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 KRT1P04264 644 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 ALDH3A1P30838 453 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 PSEN1P49768 467 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 LIG4P49917 911 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 MTMR1Q13613 665 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 SMC6Q96SB8 1091 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 PPP1R16BQ96T49 567 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 HSD17B14Q9BPX1 270 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 WNT8AQ9H1J5 351 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 GAKO14976 1311 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 ATXN2Q99700 1313 aaKnown RBP14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 YWHABP31946 246 aaKnown RBP14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 BRDTQ58F21 947 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 CDR2LQ86X02 465 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 CHURC1Q8WUH1 139 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 ZNF341Q9BYN7 854 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms