RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 CLLU1OSQ5K130 101 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 HS2ST1Q7LGA3 356 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 ACAP3Q96P50 834 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
NCK1-201ENST00000288986 TMEM117Q9H0C3 514 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 KLK14Q9P0G3 267 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 AGO2Q9UKV8 859 aaKnown RBP16.74■□□□□ 0.27
NCK1-201ENST00000288986 STYXL1Q9Y6J8 313 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 LCHNA4D1U4 455 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 CLIC2O15247 247 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 TGFB1I1O43294 461 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 OFD1O75665 1012 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 CA3P07451 260 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 DNAJB2P25686 324 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 MLH1P40692 756 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 GRM5P41594 1212 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 YARSP54577 528 aaKnown RBP16.74■□□□□ 0.27
NCK1-201ENST00000288986 NR1I3Q14994 352 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 TCP11X2Q5H9J9 407 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 ARMCX5Q6P1M9 558 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 TMEM192Q8IY95 271 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 CASD1Q96PB1 797 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 GAD1Q99259 594 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 CBWD1Q9BRT8 395 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 PCIF1Q9H4Z3 704 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 RNF19AQ9NV58 838 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 IMPACTQ9P2X3 320 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 YBX2Q9Y2T7 364 aaKnown RBP16.74■□□□□ 0.27
NCK1-201ENST00000288986 GIT1Q9Y2X7 761 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 ZMYM2Q9UBW7 1377 aa16.74■□□□□ 0.27
NCK1-201ENST00000288986 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
NCK1-201ENST00000288986 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
NCK1-201ENST00000288986 OGTO15294 1046 aa16.73■□□□□ 0.27
NCK1-201ENST00000288986 RECQL4O94761 1208 aa16.73■□□□□ 0.27
NCK1-201ENST00000288986 HABP4Q5JVS0 413 aaKnown RBP16.73■□□□□ 0.27
NCK1-201ENST00000288986 VSTM4Q8IW00 320 aa16.73■□□□□ 0.27
NCK1-201ENST00000288986 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
NCK1-201ENST00000288986 SRRTQ9BXP5 876 aaKnown RBP16.73■□□□□ 0.27
NCK1-201ENST00000288986 SLC28A3Q9HAS3 691 aa16.73■□□□□ 0.27
NCK1-201ENST00000288986 RC3H2Q9HBD1 1191 aaKnown RBP16.73■□□□□ 0.27
NCK1-201ENST00000288986 PTPRSQ13332 1948 aa16.73■□□□□ 0.27
NCK1-201ENST00000288986 POMCP01189 267 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 GARTP22102 1010 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 EEF1GP26641 437 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 TNFSF9P41273 254 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 ACOT2P49753 483 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 AFF1P51825 1210 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 KRT31Q15323 416 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 NOMO2Q5JPE7 1267 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 DRC7Q8IY82 874 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 FIBCD1Q8N539 461 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 CSGALNACT2Q8N6G5 542 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 NKX2-4Q9H2Z4 354 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 KCTD10Q9H3F6 313 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 AGPAT3Q9NRZ7 376 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 TOPORSQ9NS56 1045 aaPredicted RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 KCNJ18B7U540 433 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 CLTAP09496 248 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 SNRPFP62306 86 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 KCNJ12Q14500 433 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 SPOUT1Q5T280 376 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 CCDC186Q7Z3E2 898 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 CMTR2Q8IYT2 770 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 TIFAQ96CG3 184 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 SAAL1Q96ER3 474 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 RPS6KC1Q96S38 1066 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 RTN4Q9NQC3 1192 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 TYW1Q9NV66 732 aaKnown RBP16.72■□□□□ 0.27
NCK1-201ENST00000288986 ZKSCAN5Q9Y2L8 839 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 CHD7Q9P2D1 2997 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 CHD9Q3L8U1 2897 aa16.72■□□□□ 0.27
NCK1-201ENST00000288986 SOX1O00570 391 aaPredicted RBP16.71■□□□□ 0.27
NCK1-201ENST00000288986 PDXKO00764 312 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 LDHAP00338 332 aaKnown RBP16.71■□□□□ 0.27
NCK1-201ENST00000288986 PBX1P40424 430 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 KYAT1Q16773 422 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 ZBTB41Q5SVQ8 909 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 PPP2R2DQ66LE6 453 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 ZSCAN30Q86W11 494 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 GOLGA5Q8TBA6 731 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 FAM213AQ9BRX8 229 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 MRPL9Q9BYD2 267 aaKnown RBP16.71■□□□□ 0.27
NCK1-201ENST00000288986 KANSL3Q9P2N6 904 aa16.71■□□□□ 0.27
NCK1-201ENST00000288986 LINC01553A4QN01 128 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 GOLGA8IPA6NC78 632 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 GOLGA8JA6NMD2 632 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 FAM189A1O60320 539 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 CXCL8P10145 99 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 SCNN1GP51170 649 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 LRRC43Q8N309 656 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 ZSWIM2Q8NEG5 633 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 SP7Q8TDD2 431 aaPredicted RBP16.7■□□□□ 0.26
NCK1-201ENST00000288986 RSPH1Q8WYR4 309 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms