RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 MAPK13O15264 365 aa14.27□□□□□ -0.13
SCAF4-201ENST00000286835 TRMT10CQ7L0Y3 403 aaKnown RBP14.27□□□□□ -0.13
SCAF4-201ENST00000286835 ZNF720Q7Z2F6 126 aa14.27□□□□□ -0.13
SCAF4-201ENST00000286835 LONP2Q86WA8 852 aa14.27□□□□□ -0.13
SCAF4-201ENST00000286835 ANKMY2Q8IV38 441 aa14.27□□□□□ -0.13
SCAF4-201ENST00000286835 PPFIBP2Q8ND30 876 aa14.27□□□□□ -0.13
SCAF4-201ENST00000286835 SLC5A5Q92911 643 aa14.27□□□□□ -0.13
SCAF4-201ENST00000286835 RBM15Q96T37 977 aaKnown RBP eCLIP14.27□□□□□ -0.133e-12■■■■□ 25
SCAF4-201ENST00000286835 GPRC5CQ9NQ84 441 aa14.27□□□□□ -0.13
SCAF4-201ENST00000286835 PFASO15067 1338 aa14.27□□□□□ -0.13
SCAF4-201ENST00000286835 IPO5O00410 1097 aaKnown RBP14.26□□□□□ -0.13
SCAF4-201ENST00000286835 CCND1P24385 295 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 RASSF2P50749 326 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 RNASELQ05823 741 aaKnown RBP14.26□□□□□ -0.13
SCAF4-201ENST00000286835 C1orf131Q8NDD1 294 aaKnown RBP14.26□□□□□ -0.13
SCAF4-201ENST00000286835 MAIP1Q8WWC4 291 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 DCPSQ96C86 337 aaKnown RBP14.26□□□□□ -0.13
SCAF4-201ENST00000286835 TLCD1Q96CP7 247 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 SYNCQ9H7C4 482 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 HSPBP1Q9NZL4 362 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 CCPG1Q9ULG6 757 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 TMEM150BA6NC51 233 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 MEIS2O14770 477 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 TROVE2P10155 538 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCAF4-201ENST00000286835 DTX3LQ8TDB6 740 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 TAF1P21675 1872 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 ZNF394Q53GI3 561 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 CTAGE3PQ8IX95 158 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 ARMC2Q8NEN0 867 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 DCAF4Q8WV16 495 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 NPHS2Q9NP85 383 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 PCDHAC2Q9Y5I4 1007 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 CFAP69A5D8W1 941 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 SRRM3A6NNA2 597 aaPredicted RBP14.26□□□□□ -0.13
SCAF4-201ENST00000286835 BAG2O95816 211 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 GSTA1P08263 222 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 NUDT17P0C025 328 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 RALAP11233 206 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 NCALDP61601 193 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 OVGP1Q12889 678 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 SPARCL1Q14515 664 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 P3H1Q32P28 736 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 STRIP1Q5VSL9 837 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 PRAMEF18Q5VWM3 479 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 HAUS6Q7Z4H7 955 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 FAM228AQ86W67 206 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 ZBED8Q8IZ13 594 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 PPP1R14CQ8TAE6 165 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 ACSF2Q96CM8 615 aaPredicted RBP14.26□□□□□ -0.13
SCAF4-201ENST00000286835 ZNF341Q9BYN7 854 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 TMEM206Q9H813 350 aa14.26□□□□□ -0.13
SCAF4-201ENST00000286835 A1CFQ9NQ94 594 aaKnown RBP14.26□□□□□ -0.13
SCAF4-201ENST00000286835 MYH3P11055 1940 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 CDH16O75309 829 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 HOXD13P35453 343 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 POLE2P56282 527 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 CCDC89Q8N998 374 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.25□□□□□ -0.13
SCAF4-201ENST00000286835 WDR11Q9BZH6 1224 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 TOPORSQ9NS56 1045 aaPredicted RBP14.25□□□□□ -0.13
SCAF4-201ENST00000286835 RAB20Q9NX57 234 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 RPTORQ8N122 1335 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 TRPM3Q9HCF6 1732 aaPredicted RBP14.25□□□□□ -0.13
SCAF4-201ENST00000286835 NUP98P52948 1817 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 SLITRK3O94933 977 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 LUC7L3O95232 432 aaKnown RBP14.25□□□□□ -0.13
SCAF4-201ENST00000286835 VCAM1P19320 739 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 PPP3CAQ08209 521 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 GPS1Q13098 491 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 RCN2Q14257 317 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 LLGL2Q6P1M3 1020 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 ZDHHC24Q6UX98 284 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 PALM2Q8IXS6 379 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 NAALADL1Q9UQQ1 740 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 LACTB2Q53H82 288 aaPredicted RBP14.25□□□□□ -0.13
SCAF4-201ENST00000286835 CCDC62Q6P9F0 684 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 SLFN11Q7Z7L1 901 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 NOP9Q86U38 636 aaKnown RBP14.25□□□□□ -0.13
SCAF4-201ENST00000286835 CBWD2Q8IUF1 395 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 TRABDQ9H4I3 376 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 EXOC7Q9UPT5 735 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 STXBP5LQ9Y2K9 1186 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 PCDHB4Q9Y5E5 795 aa14.25□□□□□ -0.13
SCAF4-201ENST00000286835 PARP4Q9UKK3 1724 aaKnown RBP14.25□□□□□ -0.13
SCAF4-201ENST00000286835 MGRN1O60291 552 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ARP10275 920 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 EIF2AK2P19525 551 aaKnown RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 CEP55Q53EZ4 464 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 TMEM179Q6ZVK1 233 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ATXN2LQ8WWM7 1075 aaKnown RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ZBTB10Q96DT7 871 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 CFAP57Q96MR6 1250 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ZDHHC18Q9NUE0 388 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 CPSF2Q9P2I0 782 aaKnown RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ZFP69BQ9UJL9 534 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 TIAM2Q8IVF5 1701 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ZNF142P52746 1687 aaPredicted RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ADAMTS7Q9UKP4 1686 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 DDTLA6NHG4 134 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms