RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 OSBPL8Q9BZF1 889 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 PPIP5K2O43314 1243 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 SRGAP2CP0DJJ0 459 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 MARK3P27448 753 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 NPEPPSP55786 919 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 ASPHQ12797 758 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 DAB2IPQ5VWQ8 1189 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 KRT39Q6A163 491 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 C3orf62Q6ZUJ4 267 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 VGLL2Q8N8G2 317 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 FAM149B1Q96BN6 582 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 HEY2Q9UBP5 337 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 NR2E1Q9Y466 385 aa16.66■□□□□ 0.26
USP43-201ENST00000285199 INO80B-WBP1J3KQ70 363 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 STAT4Q14765 748 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 MMEL1Q495T6 779 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 CCDC14Q49A88 953 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 INO80BQ9C086 356 aaPredicted RBP16.65■□□□□ 0.26
USP43-201ENST00000285199 ZCWPW1Q9H0M4 648 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 RARGP13631 454 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 ITIH2P19823 946 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 POLR2BP30876 1174 aaKnown RBP16.65■□□□□ 0.26
USP43-201ENST00000285199 HIF1AQ16665 826 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 OR6B2Q6IFH4 312 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 NUDCD3Q8IVD9 361 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 LARGE2Q8N3Y3 721 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 KAT5Q92993 513 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 ACAP3Q96P50 834 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 CBWD1Q9BRT8 395 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 TSSK1BQ9BXA7 367 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 GPRC5CQ9NQ84 441 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 ZFATQ9P243 1243 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 NAALADL1Q9UQQ1 740 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 USP20Q9Y2K6 914 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 ZNF711Q9Y462 761 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 IQANK1A0A1B0GTG1 560 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 TISP43B9A030 160 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
USP43-201ENST00000285199 RHOT1Q8IXI2 618 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 HSPBP1Q9NZL4 362 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 DIP2CQ9Y2E4 1556 aa16.65■□□□□ 0.26
USP43-201ENST00000285199 GIT2Q14161 759 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 DBN1Q16643 649 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 TMEM259Q4ZIN3 620 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 LRRC55Q6ZSA7 311 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 FAM84AQ96KN4 292 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 SUGT1Q9Y2Z0 365 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 EME2A4GXA9 379 aaPredicted RBP16.64■□□□□ 0.25
USP43-201ENST00000285199 KIF3CO14782 793 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 PPP1R12AO14974 1030 aaPredicted RBP16.64■□□□□ 0.25
USP43-201ENST00000285199 ATP6V1B1P15313 513 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 DRD4P21917 467 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 GNA15P30679 374 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 TAF1BQ53T94 588 aaPredicted RBP16.64■□□□□ 0.25
USP43-201ENST00000285199 NLRP9Q7RTR0 991 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 AGGF1Q8N302 714 aaeCLIP16.64■□□□□ 0.25
USP43-201ENST00000285199 FBXL13Q8NEE6 735 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 SNRNP27Q8WVK2 155 aaKnown RBP16.64■□□□□ 0.25
USP43-201ENST00000285199 UBXN6Q9BZV1 441 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 VPS11Q9H270 941 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 PAPOLBQ9NRJ5 636 aaKnown RBP16.64■□□□□ 0.25
USP43-201ENST00000285199 PCDHGC5Q9Y5F6 944 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 RIPK2O43353 540 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 PTENP60484 403 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 FUT2Q10981 343 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 PLA2G4FQ68DD2 849 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 CCDC125Q86Z20 511 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 CENPKQ9BS16 269 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 SLCO1B3Q9NPD5 702 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 DAGLAQ9Y4D2 1042 aa16.64■□□□□ 0.25
USP43-201ENST00000285199 K7ERI5 159 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 PJA2O43164 708 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 AP3B2Q13367 1082 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 CYTH1Q15438 398 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 C1orf228Q6PIY5 440 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 SLC47A2Q86VL8 602 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 TRIML2Q8N7C3 387 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 TRIM56Q9BRZ2 755 aaKnown RBP16.63■□□□□ 0.25
USP43-201ENST00000285199 AIPL1Q9NZN9 384 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 GJA3Q9Y6H8 435 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 ENTPD5O75356 428 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 RARAP10276 462 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 SEMA3FQ13275 785 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 FAXCQ5TGI0 409 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 CCDC33Q8N5R6 958 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 GRAMD1AQ96CP6 724 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 APOL6Q9BWW8 343 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 AGPAT3Q9NRZ7 376 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 RHBDL2Q9NX52 303 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
USP43-201ENST00000285199 CCDC78A2IDD5 438 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 CREB3O43889 395 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 KRT37O76014 449 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 ZBED1O96006 694 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 RPA1P27694 616 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 SEZ6Q53EL9 994 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 CLEC4GQ6UXB4 293 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 ARID3BQ8IVW6 561 aaPredicted RBP16.63■□□□□ 0.25
USP43-201ENST00000285199 DNAAF3Q8N9W5 541 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms