RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 ASTE1Q2TB18 679 aaPredicted RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 MPZL3Q6UWV2 235 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 ZPBP2Q6X784 338 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 ZNF397Q8NF99 534 aaPredicted RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 TMEM174Q8WUU8 243 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 APOL6Q9BWW8 343 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 CPSF3Q9UKF6 684 aaKnown RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 UQCRHLA0A096LP55 91 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 C17orf102A2RUQ5 167 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 MEIS3P2A8K0S8 358 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 TMCO5BA8MYB1 307 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 GAS2O43903 313 aaKnown RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 EVI5O60447 810 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 C4BPAP04003 597 aaKnown RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 UQCRHP07919 91 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 CCDC175P0C221 793 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 HNRNPH3P31942 346 aaKnown RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 TFAMQ00059 246 aaKnown RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 PSMD6Q15008 389 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 MTFR1Q15390 333 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 PTPROQ16827 1216 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 CCSAPQ6IQ19 270 aaPredicted RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 HELQQ8TDG4 1101 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 CCDC42Q96M95 316 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 TAS2R14Q9NYV8 317 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
SSRP1-201ENST00000278412 CACNG4Q9UBN1 327 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 DNAI1Q9UI46 699 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 COL1A2P08123 1366 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 H0YCG3 227 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 HLA-DRAP01903 254 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 KLHL30Q0D2K2 578 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 GLRA4Q5JXX5 417 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 MAP3K21Q5TCX8 1036 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 KRT39Q6A163 491 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 C15orf39Q6ZRI6 1047 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 VTI1AQ96AJ9 217 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 FNBP1Q96RU3 617 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 TMEM8AQ9HCN3 771 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 GTPBP10A4D1E9 387 aaKnown RBP12.66□□□□□ -0.38
SSRP1-201ENST00000278412 OGTO15294 1046 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 HMGCRP04035 888 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 STAG3L1P0CL83 205 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 AKAP5P24588 427 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 IGFBP6P24592 240 aaPredicted RBP12.66□□□□□ -0.38
SSRP1-201ENST00000278412 ASIC2Q16515 512 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
SSRP1-201ENST00000278412 TAF3Q5VWG9 929 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 JPH2Q9BR39 696 aaPredicted RBP12.66□□□□□ -0.38
SSRP1-201ENST00000278412 NXF3Q9H4D5 531 aaKnown RBP12.66□□□□□ -0.38
SSRP1-201ENST00000278412 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
SSRP1-201ENST00000278412 RAB20Q9NX57 234 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 MACROD2A1Z1Q3 448 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 AKR1B10O60218 316 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 NPTXRO95502 500 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 PPP2R3AQ06190 1150 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 SNX17Q15036 470 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 ZACNQ401N2 412 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 C2orf40Q9H1Z8 148 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 KLK14Q9P0G3 267 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 NUB1Q9Y5A7 615 aa12.66□□□□□ -0.38
SSRP1-201ENST00000278412 LACTBL1A8MY62 500 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 CYP26A1O43174 497 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 NRDCO43847 1150 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 ERLIN2O94905 339 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 CFHP08603 1231 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 AFF1P51825 1210 aaKnown RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 GNG11P61952 73 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 SNRPFP62306 86 aaKnown RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 ORC1Q13415 861 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 NAA30Q147X3 362 aaPredicted RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 SLC10A6Q3KNW5 377 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 LHX8Q68G74 356 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 SLFN12LQ6IEE8 588 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 CATSPER4Q7RTX7 472 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 SLC47A2Q86VL8 602 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 GLYCTKQ8IVS8 523 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 BRSK2Q8IWQ3 736 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 FBXL13Q8NEE6 735 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 LNX1Q8TBB1 728 aaPredicted RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 MTG1Q9BT17 334 aaPredicted RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 UPF3AQ9H1J1 476 aaKnown RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 GOLPH3Q9H4A6 298 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 DDX20Q9UHI6 824 aaKnown RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 GTF2IRD1Q9UHL9 959 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 TNFSF13BQ9Y275 285 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 PPME1Q9Y570 386 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 RRN3P2A6NIE6 340 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 FKTNO75072 461 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 SGPL1O95470 568 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 DARSP14868 501 aaKnown RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 HOXC8P31273 242 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 PIK3CAP42336 1068 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms