RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 CLCN5P51795 746 aa19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 PEX3P56589 373 aa19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 ELAVL2Q12926 359 aaKnown RBP19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 PSMD5Q16401 504 aa19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 DAW1Q8N136 415 aa19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 ATOH1Q92858 354 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 PPP1R10Q96QC0 940 aaKnown RBP19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 MYADMQ96S97 322 aa19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 DUSP12Q9UNI6 340 aa19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 HIP1RO75146 1068 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 GLRA4Q5JXX5 417 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 MCTP1Q6DN14 999 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 PDXDC1Q6P996 788 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 DCLRE1AQ6PJP8 1040 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 RSAD2Q8WXG1 361 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 DRC1Q96MC2 740 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 ACO2Q99798 780 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 MMTAG2Q9BU76 263 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 RUSC1Q9BVN2 902 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 TMEM134Q9H6X4 195 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 FAM86C1Q9NVL1 165 aa19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.23■□□□□ 0.67
CSNK1D-201ENST00000269361 H0Y858 1186 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 TMEM189-UBE2V1I3L0A0 370 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 ST18O60284 1047 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 B3GAT3O94766 335 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 DMP1Q13316 513 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 RILPL1Q5EBL4 403 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 RINT1Q6NUQ1 792 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 C1orf186Q6ZWK4 172 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 KCNK18Q7Z418 384 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 FLCNQ8NFG4 579 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 NXPE3Q969Y0 559 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 MRPL4Q9BYD3 311 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 PTPRHQ9HD43 1115 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 KMT5AQ9NQR1 393 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 FBXW11Q9UKB1 542 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 FBXL21Q9UKT6 434 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 RBM19Q9Y4C8 960 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 PHLPP2Q6ZVD8 1323 aa19.22■□□□□ 0.67
CSNK1D-201ENST00000269361 SMIM28A0A1B0GU29 152 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 ADAM12O43184 909 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 NARSO43776 548 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 HNRNPA1P09651 372 aaKnown RBP eCLIP19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 LAMP2P13473 410 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 NPR3P17342 541 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 FGFR3P22607 806 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 IGFBP6P24592 240 aaPredicted RBP19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 GRM5P41594 1212 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 CLCNKBP51801 687 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 YARSP54577 528 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 MAPK7Q13164 816 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 UPP1Q16831 310 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 LIN9Q5TKA1 542 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 ALKAL1Q6UXT8 129 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 TAS1R3Q7RTX0 852 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 SLC44A3Q8N4M1 653 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 TMX3Q96JJ7 454 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 UROC1Q96N76 676 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 CCDC94Q9BW85 323 aaPredicted RBP19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 TARS2Q9BW92 718 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 CDT1Q9H211 546 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 C17orf75Q9HAS0 396 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 TOPORSQ9NS56 1045 aaPredicted RBP19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 ARHGAP28Q9P2N2 729 aa19.21■□□□□ 0.67
CSNK1D-201ENST00000269361 DENND4AQ7Z401 1863 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 KMT2EQ8IZD2 1858 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 SFI1A8K8P3 1242 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 ATP2C1P98194 919 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 RAB33AQ14088 237 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 ZRSR1Q15695 479 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 ZNF568Q3ZCX4 644 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 XKR4Q5GH76 650 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 PPM1LQ5SGD2 360 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 CWF19L1Q69YN2 538 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 CD300LGQ6UXG3 332 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 GET4Q7L5D6 327 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 SIX5Q8N196 739 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 CEP120Q8N960 986 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 NTPCRQ9BSD7 190 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 TIPINQ9BVW5 301 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 WNT16Q9UBV4 365 aa19.2■□□□□ 0.66
CSNK1D-201ENST00000269361 TRAPPC3O43617 180 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 C8AP07357 584 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 MCF2P10911 925 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 FSHRP23945 695 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 GUCY2CP25092 1073 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 OR1D2P34982 312 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 OSTNP61366 133 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 HYIQ5T013 277 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 GRASPQ7Z6J2 395 aaPredicted RBP19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 KCTD17Q8N5Z5 321 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 TCHPQ9BT92 498 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 GOLGA2P5Q9HBQ8 144 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 SLC38A7Q9NVC3 462 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 MTRRQ9UBK8 725 aa19.19■□□□□ 0.66
CSNK1D-201ENST00000269361 TDRD15B5MCY1 1934 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms