RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 SLFN12LQ6IEE8 588 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 SCFD2Q8WU76 684 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 CCDC102AQ96A19 550 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 ZIC5Q96T25 663 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■■■□ 21.7
CHKA-201ENST00000265689 PDGFCQ9NRA1 345 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 RBAKQ9NYW8 714 aaPredicted RBP18.15■□□□□ 0.5
CHKA-201ENST00000265689 LAMA2P24043 3122 aaKnown RBP18.15■□□□□ 0.5
CHKA-201ENST00000265689 A0A0B4J269 797 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 ESYT3A0FGR9 886 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 PGRMC1O00264 195 aaKnown RBP18.15■□□□□ 0.5
CHKA-201ENST00000265689 RAD51CO43502 376 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 HLA-DRAP01903 254 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 C4BPAP04003 597 aaKnown RBP18.15■□□□□ 0.5
CHKA-201ENST00000265689 COPB2P35606 906 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 TNNC1P63316 161 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 GUCY2DQ02846 1103 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
CHKA-201ENST00000265689 ZACNQ401N2 412 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 SND1Q7KZF4 910 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHKA-201ENST00000265689 RHOT2Q8IXI1 618 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 DHX37Q8IY37 1157 aaKnown RBP18.15■□□□□ 0.5
CHKA-201ENST00000265689 LRRC71Q8N4P6 559 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 SPATA33Q96N06 139 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 TMEM134Q9H6X4 195 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 VIPAS39Q9H9C1 493 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 EPB41L5Q9HCM4 733 aa18.15■□□□□ 0.5
CHKA-201ENST00000265689 PDE6CP51160 858 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 CDR2Q01850 454 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 DCAF12L1Q5VU92 463 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 SPOPLQ6IQ16 392 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 RASGEF1CQ8N431 466 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 BBXQ8WY36 941 aaPredicted RBP18.14■□□□□ 0.49
CHKA-201ENST00000265689 DDX1Q92499 740 aaKnown RBP18.14■□□□□ 0.49
CHKA-201ENST00000265689 C1orf112Q9NSG2 853 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 ADGRA2Q96PE1 1338 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 ZBTB42B2RXF5 422 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 KIAA0391O15091 583 aaKnown RBP18.14■□□□□ 0.49
CHKA-201ENST00000265689 LGR5O75473 907 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 VNN1O95497 513 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 SRGAP2CP0DJJ0 459 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 GZMAP12544 262 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 PIK3CAP42336 1068 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 CARSP49589 748 aaKnown RBP18.14■□□□□ 0.49
CHKA-201ENST00000265689 GCNT1Q02742 428 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 BIRC3Q13489 604 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 SPRYD7Q5W111 196 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 CCDC62Q6P9F0 684 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 FAM167AQ96KS9 214 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 MROH8Q9H579 483 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 GDF3Q9NR23 364 aa18.14■□□□□ 0.49
CHKA-201ENST00000265689 TMEM110-MUSTN1A8MSY1 372 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 ITGA4P13612 1032 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 SCP2P22307 547 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 TRADDQ15628 312 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 KCNV1Q6PIU1 500 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 IFT20Q8IY31 132 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 TRAPPC12Q8WVT3 735 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 ACBD3Q9H3P7 528 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 ALG6Q9Y672 507 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 SIP14410 1827 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 KRIT1O00522 736 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 ZC3H11AO75152 810 aaKnown RBP eCLIP18.13■□□□□ 0.493e-7■□□□□ 8.4
CHKA-201ENST00000265689 TXNP10599 105 aaKnown RBP18.13■□□□□ 0.49
CHKA-201ENST00000265689 TNFRSF8P28908 595 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 HADHBP55084 474 aaKnown RBP18.13■□□□□ 0.49
CHKA-201ENST00000265689 PLCB4Q15147 1175 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 KCTD19Q17RG1 926 aaPredicted RBP18.13■□□□□ 0.49
CHKA-201ENST00000265689 WDR44Q5JSH3 913 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 ZBTB33Q86T24 672 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 ATP8B4Q8TF62 1192 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 IFT81Q8WYA0 676 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 ZBTB10Q96DT7 871 aa18.13■□□□□ 0.49
CHKA-201ENST00000265689 ZNF668Q96K58 619 aaPredicted RBP18.13■□□□□ 0.49
CHKA-201ENST00000265689 PHACTR2O75167 634 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 LDHAP00338 332 aaKnown RBP18.12■□□□□ 0.49
CHKA-201ENST00000265689 EPHB4P54760 987 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 LAMTOR4Q0VGL1 99 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 IER5Q5VY09 327 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 SCARA3Q6AZY7 606 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 CASKIN2Q8WXE0 1202 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 CPA4Q9UI42 421 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 CNTNAP2Q9UHC6 1331 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 IGF2BP3O00425 579 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHKA-201ENST00000265689 TNFSF9P41273 254 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 ZNF157P51786 506 aaPredicted RBP18.12■□□□□ 0.49
CHKA-201ENST00000265689 TCEAL1Q15170 157 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 ENOSF1Q7L5Y1 443 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 PLPPR4Q7Z2D5 763 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 RNF149Q8NC42 400 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 OR5B17Q8NGF7 314 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 ALG3Q92685 438 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 DDX47Q9H0S4 455 aaKnown RBP18.12■□□□□ 0.49
CHKA-201ENST00000265689 VPS18Q9P253 973 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 NFU1Q9UMS0 254 aa18.12■□□□□ 0.49
CHKA-201ENST00000265689 MSCO60682 206 aa18.11■□□□□ 0.49
CHKA-201ENST00000265689 GJB1P08034 283 aa18.11■□□□□ 0.49
CHKA-201ENST00000265689 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
CHKA-201ENST00000265689 MESDQ14696 234 aa18.11■□□□□ 0.49
CHKA-201ENST00000265689 CALR3Q96L12 384 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms