RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 C18orf25Q96B23 403 aaPredicted RBP7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 ACCSQ96QU6 501 aa7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 FAM213AQ9BRX8 229 aa7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 C11orf84Q9BUA3 381 aaPredicted RBP7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 STRA6Q9BX79 667 aa7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 TUBGCP4Q9UGJ1 667 aa7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 GIT1Q9Y2X7 761 aa7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 PCDHB13Q9Y5F0 798 aa7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 PCDHB12Q9Y5F1 795 aa7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 VWA8A3KMH1 1905 aa7.91□□□□□ -1.14
DEPDC1B-201ENST00000265036 A0A0B4J269 797 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 I3L4J1 428 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 FAM189A1O60320 539 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 LAG3P18627 525 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 GRM5P41594 1212 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 YARSP54577 528 aaKnown RBP7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 CAMK1Q14012 370 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 SKIV2LQ15477 1246 aaKnown RBP7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 ENOX2Q16206 610 aaKnown RBP7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 SLC10A6Q3KNW5 377 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 PLPP4Q5VZY2 271 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 LMBRD2Q68DH5 695 aaPredicted RBP7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 ARMCX5Q6P1M9 558 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 EP400NLQ6ZTU2 488 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 RBM23Q86U06 439 aaKnown RBP7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 RDH13Q8NBN7 331 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 TMEM169Q96HH4 297 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 SNX27Q96L92 541 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 ACAP3Q96P50 834 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 PRDM6Q9NQX0 595 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 USP25Q9UHP3 1055 aa7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 AGO2Q9UKV8 859 aaKnown RBP7.9□□□□□ -1.14
DEPDC1B-201ENST00000265036 H3BNC9 293 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 C2CD2LO14523 706 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 NRP1O14786 923 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 OGTO15294 1046 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 PIGRP01833 764 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 GALTP07902 379 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 GTF2F1P35269 517 aaKnown RBP eCLIP7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 RBM10P98175 930 aaKnown RBP7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 GRIK3Q13003 919 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 EPM2AIP1Q7L775 607 aaPredicted RBP7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 GBP4Q96PP9 640 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 VN1R3Q9BXE9 311 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 ST6GALNAC4Q9H4F1 302 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 TOPORSQ9NS56 1045 aaPredicted RBP7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 RNF216Q9NWF9 866 aaPredicted RBP7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 MARCH5Q9NX47 278 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 KCNG1Q9UIX4 513 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 PCDHA5Q9Y5H7 936 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 MTCH2Q9Y6C9 303 aa7.9□□□□□ -1.15
DEPDC1B-201ENST00000265036 SMIM28A0A1B0GU29 152 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 PVALEFA0A1B0GWK0 134 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 TGFB1I1O43294 461 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 KIF4AO95239 1232 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 THP07101 528 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 NFICP08651 508 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 ERVFC1P60507 584 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 CNNM4Q6P4Q7 775 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 APBB1IPQ7Z5R6 666 aaPredicted RBP7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 ADGRD2Q7Z7M1 963 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 CBWD2Q8IUF1 395 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 GLYCTKQ8IVS8 523 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 COLGALT2Q8IYK4 626 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 SLC39A11Q8N1S5 342 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 SLC17A8Q8NDX2 589 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 C3orf58Q8NDZ4 430 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 MAFAQ8NHW3 353 aaPredicted RBP7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 SPPL3Q8TCT6 385 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 MICAL1Q8TDZ2 1067 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 KIF12Q96FN5 646 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 ENTPD7Q9NQZ7 604 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 AAASQ9NRG9 546 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 AGPAT3Q9NRZ7 376 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 LMBRD1Q9NUN5 540 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 EXOC7Q9UPT5 735 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 HIDE1A8MVS5 230 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 LACTBL1A8MY62 500 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 PPEF2O14830 753 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 PER2O15055 1255 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 CLCNKBP51801 687 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 CDR1P51861 262 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 PPP2R3AQ06190 1150 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 DSC1Q08554 894 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 NAB2Q15742 525 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 JADE1Q6IE81 842 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 CRELD2Q6UXH1 353 aaPredicted RBP7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 STXBP4Q6ZWJ1 553 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 SMARCE1Q969G3 411 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 HVCN1Q96D96 273 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 IGSF21Q96ID5 467 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 TCF25Q9BQ70 676 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 RPF1Q9H9Y2 349 aaKnown RBP7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 UBN1Q9NPG3 1134 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 SPG21Q9NZD8 308 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 HSPBP1Q9NZL4 362 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 FAN1Q9Y2M0 1017 aa7.89□□□□□ -1.15
DEPDC1B-201ENST00000265036 C5orf67F2Z3F1 127 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 EIF3DO15371 548 aaKnown RBP eCLIP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 RHOBTB3O94955 611 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms