RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MDH1BQ5I0G3 518 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 C10orf76Q5T2E6 689 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 C6orf118Q5T5N4 469 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 ZNF720Q7Z2F6 126 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 LONP2Q86WA8 852 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 AMNQ9BXJ7 453 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 TMEM117Q9H0C3 514 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 MYLK2Q9H1R3 596 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 TDRD3Q9H7E2 651 aaKnown RBP13.88□□□□□ -0.19
SNX1-201ENST00000261889 ATP6V0A4Q9HBG4 840 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 METTL14Q9HCE5 456 aaKnown RBP13.88□□□□□ -0.19
SNX1-201ENST00000261889 LAMB1P07942 1786 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 RASA4BC9J798 803 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 RASA4O43374 803 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 EIF3BP55884 814 aaKnown RBP13.88□□□□□ -0.19
SNX1-201ENST00000261889 COPS2P61201 443 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 GPC5P78333 572 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 EFTUD2Q15029 972 aaKnown RBP eCLIP13.88□□□□□ -0.197e-14■■■■■ 31
SNX1-201ENST00000261889 SEZ6Q53EL9 994 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 MIGA2Q7L4E1 593 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 SLFN12Q8IYM2 578 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 UTP4Q969X6 686 aaKnown RBP13.88□□□□□ -0.19
SNX1-201ENST00000261889 CYP3A7-CYP3A51PA0A087WV96 503 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 ADRB2P07550 413 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 NPR1P16066 1061 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 PDE6CP51160 858 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 PEX3P56589 373 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 DYNLT1P63172 113 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 NOP14P78316 857 aaKnown RBP13.88□□□□□ -0.19
SNX1-201ENST00000261889 SGSM1Q2NKQ1 1148 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 C1orf186Q6ZWK4 172 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 SH3BP5LQ7L8J4 393 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 SEC14L1Q92503 715 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 PRR11Q96HE9 360 aaPredicted RBP13.88□□□□□ -0.19
SNX1-201ENST00000261889 ZC3H12CQ9C0D7 883 aaKnown RBP13.88□□□□□ -0.19
SNX1-201ENST00000261889 UNC45AQ9H3U1 944 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 PIDD1Q9HB75 910 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 NAALADL1Q9UQQ1 740 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 TELO2Q9Y4R8 837 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 ARHGEF35A5YM69 484 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 SUN1O94901 812 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 HLA-DOAP06340 250 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 NUDT17P0C025 328 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 RALAP11233 206 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 ATF7P17544 494 aaPredicted RBP13.87□□□□□ -0.19
SNX1-201ENST00000261889 CPA2P48052 419 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 PEX5P50542 639 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 HYIQ5T013 277 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 GPATCH4Q5T3I0 446 aaKnown RBP13.87□□□□□ -0.19
SNX1-201ENST00000261889 DAW1Q8N136 415 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 EPS8L1Q8TE68 723 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 PGM2Q96G03 612 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 PITPNM3Q9BZ71 974 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 A1CFQ9NQ94 594 aaKnown RBP13.87□□□□□ -0.19
SNX1-201ENST00000261889 NUMBLQ9Y6R0 609 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 EYA4O95677 639 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 AGTP01019 485 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 HARSP12081 509 aaKnown RBP13.87□□□□□ -0.19
SNX1-201ENST00000261889 APOBEC3HQ6NTF7 200 aaKnown RBP13.87□□□□□ -0.19
SNX1-201ENST00000261889 TAS1R2Q8TE23 839 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 FIZ1Q96SL8 496 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 GLIS2Q9BZE0 524 aaPredicted RBP13.87□□□□□ -0.19
SNX1-201ENST00000261889 PCDHA3Q9Y5H8 950 aa13.87□□□□□ -0.19
SNX1-201ENST00000261889 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 KRT15P19012 456 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 MTMR2Q13614 643 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 IL31RAQ8NI17 732 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 FHDC1Q9C0D6 1143 aaPredicted RBP13.86□□□□□ -0.19
SNX1-201ENST00000261889 GRID1Q9ULK0 1009 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 PASKQ96RG2 1323 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 A0A1W2PPM1 405 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 BTNL10A8MVZ5 291 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 C21orf2O43822 256 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 CHRNA3P32297 505 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 VAMP7P51809 220 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 SEMA3FQ13275 785 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 ZNF394Q53GI3 561 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 ARMC3Q5W041 872 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 RFWD3Q6PCD5 774 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 OTOP1Q7RTM1 612 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 TMEM130Q8N3G9 435 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 ZNF577Q9BSK1 485 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 NINJ2Q9NZG7 142 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 IGKV6D-41A0A0C4DH26 115 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 SPDYE5A6NIY4 337 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 TCP10L2B9ZVM9 353 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 BBOX1O75936 387 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 RAD23BP54727 409 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 SIX1Q15475 284 aaPredicted RBP13.86□□□□□ -0.19
SNX1-201ENST00000261889 C11orf70Q9BRQ4 267 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 SYT11Q9BT88 431 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 KIAA1683Q9H0B3 1180 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 NSRP1Q9H0G5 558 aaKnown RBP13.86□□□□□ -0.19
SNX1-201ENST00000261889 VPS37BQ9H9H4 285 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms