RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 ADCY6O43306 1168 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 ZFP36P26651 326 aaKnown RBP6.61□□□□□ -1.35
TRA2B-201ENST00000259043 MTNR1BP49286 362 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 HSPA2P54652 639 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 CCT2P78371 535 aaKnown RBP6.61□□□□□ -1.35
TRA2B-201ENST00000259043 PPP3CAQ08209 521 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 ANO4Q32M45 955 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 TOR2AQ5JU69 321 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 PRAMEF14Q5SWL7 426 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 Q6ZPA2 131 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 SYT12Q8IV01 421 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 GPR156Q8NFN8 814 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 MDM1Q8TC05 714 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 CDC5LQ99459 802 aaKnown RBP6.61□□□□□ -1.35
TRA2B-201ENST00000259043 KCNH6Q9H252 994 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 EPC1Q9H2F5 836 aa6.61□□□□□ -1.35
TRA2B-201ENST00000259043 SBNO2Q9Y2G9 1366 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 AHRRA9YTQ3 701 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 PHF2O75151 1096 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 MTHFD2P13995 350 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 MFSD14BQ5SR56 506 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 DRICH1Q6PGQ1 229 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-201ENST00000259043 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRA2B-201ENST00000259043 SLC25A43Q8WUT9 341 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-201ENST00000259043 FATE1Q969F0 183 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 VOPP1Q96AW1 172 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 NDC1Q9BTX1 674 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 CTTNBP2Q8WZ74 1663 aa6.6□□□□□ -1.35
TRA2B-201ENST00000259043 SIGLEC1Q9BZZ2 1709 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 ATRNL1Q5VV63 1379 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 B5MCH6 92 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 TRIM24O15164 1050 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 KRT4P19013 534 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 MRGPREQ86SM8 312 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 TRMT2AQ8IZ69 625 aaKnown RBP6.59□□□□□ -1.35
TRA2B-201ENST00000259043 REPS2Q8NFH8 660 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 ATL2Q8NHH9 583 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 TTPALQ9BTX7 342 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 GREM2Q9H772 168 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 SPC25Q9HBM1 224 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 DMRT3Q9NQL9 472 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 SORCS3Q9UPU3 1222 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 CHST2Q9Y4C5 530 aa6.59□□□□□ -1.35
TRA2B-201ENST00000259043 TBKBP1A7MCY6 615 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 LEFTY2O00292 366 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 FOXN1O15353 648 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 AKR1B10O60218 316 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 ADSLP30566 484 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-201ENST00000259043 APOBEC3AP31941 199 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-201ENST00000259043 FLT3LGP49771 235 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 BMT2Q1RMZ1 405 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 INAVAQ3KP66 663 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 ZNF572Q7Z3I7 529 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-201ENST00000259043 CBARPQ8N350 705 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-201ENST00000259043 ZNF276Q8N554 614 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 OR7D4Q8NG98 312 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 LENG9Q96B70 501 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 ACE2Q9BYF1 805 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-201ENST00000259043 ZNF768Q9H5H4 540 aaKnown RBP6.58□□□□□ -1.36
TRA2B-201ENST00000259043 BCO1Q9HAY6 547 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 DNAJC28Q9NX36 388 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 ARHGEF40Q8TER5 1519 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 ABCA9Q8IUA7 1624 aa6.58□□□□□ -1.36
TRA2B-201ENST00000259043 TMEM191CA6NGB0 347 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 PRR5-ARHGAP8B1AHC4 643 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 RPS6KA4O75676 772 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 SREBF1P36956 1147 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 MCAMP43121 646 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 FAM189BP81408 668 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 MALLQ13021 153 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 MUM1L1Q5H9M0 696 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 FAM47AQ5JRC9 791 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 METRNLQ641Q3 311 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 PDZD4Q76G19 769 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-201ENST00000259043 SLC35B2Q8TB61 432 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 CPT1CQ8TCG5 803 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 NRDE2Q9H7Z3 1164 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 ZNF277Q9NRM2 450 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-201ENST00000259043 RBM12Q9NTZ6 932 aaKnown RBP6.57□□□□□ -1.36
TRA2B-201ENST00000259043 CLCA2Q9UQC9 943 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 HDAC5Q9UQL6 1122 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 ATP8A1Q9Y2Q0 1164 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 HS3ST4Q9Y661 456 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 RAPGEF2Q9Y4G8 1499 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 FER1L4A9Z1Z3 1794 aa6.57□□□□□ -1.36
TRA2B-201ENST00000259043 ATP10BO94823 1461 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 TRIM75PA6NK02 468 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 SCAF4O95104 1147 aaKnown RBP6.56□□□□□ -1.36
TRA2B-201ENST00000259043 OSMP13725 252 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 ALOX15P16050 662 aaPredicted RBP6.56□□□□□ -1.36
TRA2B-201ENST00000259043 PTGS2P35354 604 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 COL10A1Q03692 680 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 KLF1Q13351 362 aaPredicted RBP6.56□□□□□ -1.36
TRA2B-201ENST00000259043 SEPT2Q15019 361 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 NECAB2Q7Z6G3 386 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 CNTD1Q8N815 330 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 HAS1Q92839 578 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 SLC5A4Q9NY91 659 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 MCM8Q9UJA3 840 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 FZD1Q9UP38 647 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms