RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 PRPF31Q8WWY3 499 aaKnown RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 SLC35C1Q96A29 364 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 SYT15Q9BQS2 421 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP30-201ENST00000257548 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 INHBAP08476 426 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 MAGEA4P43358 317 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 ALDH18A1P54886 795 aaKnown RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 SIK1P57059 783 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 TMPRSS15P98073 1019 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 ARHGAP4P98171 946 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 ROR2Q01974 943 aaKnown RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 SEMA3FQ13275 785 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 RIPK1Q13546 671 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 ZNF394Q53GI3 561 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 IZUMO2Q6UXV1 221 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 CENPTQ96BT3 561 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 DNAJC19Q96DA6 116 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 SERPINB12Q96P63 405 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 CENPKQ9BS16 269 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 TMEM117Q9H0C3 514 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 TMEM165Q9HC07 324 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 SRRM3A6NNA2 597 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 CCDC22O60826 627 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 STK10O94804 968 aaKnown RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 AKR1B1P15121 316 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
USP30-201ENST00000257548 TLDC1Q6P9B6 456 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 FNBP1Q96RU3 617 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 DENND2DQ9H6A0 471 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 AJAP1Q9UKB5 411 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 PDXKO00764 312 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 RTN2O75298 545 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 SGPL1O95470 568 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 RALAP11233 206 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 ARSEP51690 589 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 RPS6KA3P51812 740 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 KLRC3Q07444 240 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 EDRF1Q3B7T1 1238 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 TTC27Q6P3X3 843 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 RBBP8NLQ8NC74 664 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 CKAP2Q8WWK9 683 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 RSAD2Q8WXG1 361 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 ROPN1BQ9BZX4 212 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 ROPN1Q9HAT0 212 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 DDX18Q9NVP1 670 aaKnown RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 NMRK1Q9NWW6 199 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 FAF1Q9UNN5 650 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 STRCP1A6NGW2 1772 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 NUDT17P0C025 328 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 LINGO3P0C6S8 592 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 BMP3P12645 472 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 KRT10P13645 584 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 GSTT1P30711 240 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 ANO7Q6IWH7 933 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 HES6Q96HZ4 224 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 MAGEB18Q96M61 343 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
USP30-201ENST00000257548 RAB20Q9NX57 234 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
USP30-201ENST00000257548 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 LOC100653049A0A140TA62 436 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 GNPATO15228 680 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 KRT34O76011 436 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 CASC4Q6P4E1 433 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 CYP4X1Q8N118 509 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 CYP2W1Q8TAV3 490 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 KCNQ5Q9NR82 932 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 FBXO6Q9NRD1 293 aaPredicted RBP13.08□□□□□ -0.32
USP30-201ENST00000257548 MAD1L1Q9Y6D9 718 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 RPTORQ8N122 1335 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 TISP43B9A030 160 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 O00370 1275 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 AHCYL1O43865 530 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 TOM1L1O75674 476 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 GRIK3Q13003 919 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 PPP2R5DQ14738 602 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 KHDC1Q4VXA5 237 aaKnown RBP13.08□□□□□ -0.32
USP30-201ENST00000257548 FAM102BQ5T8I3 360 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 TBC1D9BQ66K14 1250 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 CPXCR1Q8N123 301 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 AGR3Q8TD06 166 aa13.08□□□□□ -0.32
USP30-201ENST00000257548 EZH1Q92800 747 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms