RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MCCC1Q96RQ3 725 aaPredicted RBP14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 SEPT5Q99719 369 aaPredicted RBP14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 SENP6Q9GZR1 1112 aaPredicted RBP14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 HSPBP1Q9NZL4 362 aa14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 TBC1D8O95759 1140 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 CYP3A4P08684 503 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 MNAT1P51948 309 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 PPM1LQ5SGD2 360 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 HDXQ7Z353 690 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 DNAAF3Q8N9W5 541 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 ACER1Q8TDN7 264 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 CAPZA3Q96KX2 299 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 GPC5P78333 572 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 NFIAQ12857 509 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 MEI1Q5TIA1 1274 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 PRDM16Q9HAZ2 1276 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 TMEM8AQ9HCN3 771 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 SETSIPP0DME0 302 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 ARL4DP49703 201 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 LRRC41Q15345 812 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 SELENOSQ9BQE4 189 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 KCNK9Q9NPC2 374 aa14.27□□□□□ -0.13
PRPF38A-201ENST00000257181 TMEM270Q6UE05 265 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 UNC45BQ8IWX7 931 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 SLC7A5P2Q9GIP4 190 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 AKAP7Q9P0M2 348 aaPredicted RBP14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 Q9Y3F1 56 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 MRFAP1Q9Y605 127 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 NALCNQ8IZF0 1738 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 TBKBP1A7MCY6 615 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 CFAP99D6REC4 459 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 FZD9O00144 591 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 SMAPO00193 183 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 CHEK2O96017 543 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 TCP11X2Q5H9J9 407 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 FSD1LQ9BXM9 530 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 NIF3L1Q9GZT8 377 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 CREBZFQ9NS37 354 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 EPN1Q9Y6I3 576 aaPredicted RBP14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 TAC1P20366 129 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 TERF1P54274 439 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 SLC27A1Q6PCB7 646 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 TRAPPC11Q7Z392 1133 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 FBF1Q8TES7 1133 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 DCUN1D1Q96GG9 259 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 IFNB1P01574 187 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 VCLP18206 1134 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 RPS6KA2Q15349 733 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 CTXN3Q4LDR2 81 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 SAMD11Q96NU1 681 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 ASB7Q9H672 318 aa14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 G3BP2Q9UN86 482 aaKnown RBP14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 MAGED2Q9UNF1 606 aaPredicted RBP14.26□□□□□ -0.13
PRPF38A-201ENST00000257181 SGK1O00141 431 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 DCAF6Q58WW2 860 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 SPIRE2Q8WWL2 714 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 KIF2CQ99661 725 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 ARID3AQ99856 593 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 VPS9D1Q9Y2B5 631 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 CFAP69A5D8W1 941 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 KLRC2P26717 231 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 ACCSLQ4AC99 568 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 KIFC3Q9BVG8 833 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 MRPL17Q9NRX2 175 aaKnown RBP14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 TLK1Q9UKI8 766 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 PCDHB5Q9Y5E4 795 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 TOM1L1O75674 476 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 CIB2O75838 187 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 KRT3P12035 628 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 PSMC1P62191 440 aaKnown RBP14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 BYSLQ13895 437 aaKnown RBP14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 TMEM143Q96AN5 459 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 HAUS8Q9BT25 410 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 C1QTNF7Q9BXJ2 289 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 LRRC37A3O60309 1634 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 TRIM66O15016 1216 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 ECEL1O95672 775 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 ADH1AP07327 375 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 KLRC1P26715 233 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 AVPR1AP37288 418 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 MRPS6P82932 125 aaKnown RBP14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 PANX2Q96RD6 677 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 BCL2L12Q9HB09 334 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 DPP3Q9NY33 737 aa14.25□□□□□ -0.13
PRPF38A-201ENST00000257181 KCNK3O14649 394 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 ADORA2BP29275 332 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 SOX5P35711 763 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 ARHGEF7Q14155 803 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 MESDQ14696 234 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 MAP3K21Q5TCX8 1036 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 ZPBP2Q6X784 338 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 METTL3Q86U44 580 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms