RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 POU5F1Q01860 360 aaKnown RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 MTHFD1LQ6UB35 978 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 B3GNT9Q6UX72 402 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 ATP8B4Q8TF62 1192 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 TEKT4Q8WW24 435 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 KRT35Q92764 455 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 STRA6Q9BX79 667 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 PPANQ9NQ55 473 aaKnown RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 ABCF3Q9NUQ8 709 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 HAUS2Q9NVX0 235 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 SEL1LQ9UBV2 794 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 ZNF70Q9UC06 446 aaPredicted RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 GOLGA8IPA6NC78 632 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 GOLGA8JA6NMD2 632 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 HMGB1P1B2RPK0 211 aaPredicted RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 MDH1P40925 334 aaKnown RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 DHX9Q08211 1270 aaKnown RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 SPP2Q13103 211 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 RCN1Q15293 331 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 PTGISQ16647 500 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 C7orf43Q8WVR3 580 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 KCNN1Q92952 543 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 AGPAT1Q99943 283 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 MXRA8Q9BRK3 442 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 EPN3Q9H201 632 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 VCPKMTQ9H867 229 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 CORO1CQ9ULV4 474 aaPredicted RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 ATP8A1Q9Y2Q0 1164 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 MRPL11Q9Y3B7 192 aaKnown RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 STK10O94804 968 aaKnown RBP12.08□□□□□ -0.47
PDE6B-201ENST00000255622 TRPC1P48995 793 aa12.08□□□□□ -0.47
PDE6B-201ENST00000255622 CBX3Q13185 183 aa12.08□□□□□ -0.47
PDE6B-201ENST00000255622 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.47
PDE6B-201ENST00000255622 UBAP2Q5T6F2 1119 aaKnown RBP12.08□□□□□ -0.47
PDE6B-201ENST00000255622 STYK1Q6J9G0 422 aa12.08□□□□□ -0.47
PDE6B-201ENST00000255622 MIER3Q7Z3K6 550 aa12.08□□□□□ -0.47
PDE6B-201ENST00000255622 TMOD2Q9NZR1 351 aa12.08□□□□□ -0.47
PDE6B-201ENST00000255622 UTP11Q9Y3A2 253 aaKnown RBP12.08□□□□□ -0.47
PDE6B-201ENST00000255622 ZHX2Q9Y6X8 837 aa12.08□□□□□ -0.47
PDE6B-201ENST00000255622 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.48
PDE6B-201ENST00000255622 ATP4AP20648 1035 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
PDE6B-201ENST00000255622 IRF5Q13568 498 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 LLGL1Q15334 1064 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 STXBP4Q6ZWJ1 553 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 CPXCR1Q8N123 301 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 CHURC1Q8WUH1 139 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 LRRC45Q96CN5 670 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 C18orf8Q96DM3 657 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 BTBD6Q96KE9 485 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 SLITRK6Q9H5Y7 841 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 CNOT8Q9UFF9 292 aaKnown RBP12.08□□□□□ -0.48
PDE6B-201ENST00000255622 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 ZNF510Q9Y2H8 683 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 SPO11Q9Y5K1 396 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 UBE4BO95155 1302 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 E7EVH7 732 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 RASSF9O75901 435 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 DR1Q01658 176 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 NSUN2Q08J23 767 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDE6B-201ENST00000255622 KIF22Q14807 665 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 UGCGQ16739 394 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 GALNT15Q8N3T1 639 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 ZNF473Q8WTR7 871 aaKnown RBP12.08□□□□□ -0.48
PDE6B-201ENST00000255622 FAM84AQ96KN4 292 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 CEP295NLQ96MC4 621 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 KIFC3Q9BVG8 833 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
PDE6B-201ENST00000255622 CTTNBP2NLQ9P2B4 639 aa12.08□□□□□ -0.48
PDE6B-201ENST00000255622 PCNTO95613 3336 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 ATP8B3O60423 1300 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 SGPL1O95470 568 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 VAMP7P51809 220 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 NUGGCQ68CJ6 796 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 CHADLQ6NUI6 762 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 CCT8L2Q96SF2 557 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 NOVA2Q9UNW9 492 aaKnown RBP12.07□□□□□ -0.48
PDE6B-201ENST00000255622 C2CD2Q9Y426 696 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 L3MBTL1Q9Y468 752 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 ALG6Q9Y672 507 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 ZNF536O15090 1300 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 ANKRD62A6NC57 917 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
PDE6B-201ENST00000255622 CALCAP01258 141 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 KRT13P13646 458 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 PTENP60484 403 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 DLGAP5Q15398 846 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 ODF2Q5BJF6 829 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 ZFYVE27Q5T4F4 411 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 FAM117BQ6P1L5 589 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 LRIG3Q6UXM1 1119 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 NLRP14Q86W24 1093 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 ZDHHC14Q8IZN3 488 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 MYCBPAPQ8TBZ2 947 aa12.07□□□□□ -0.48
PDE6B-201ENST00000255622 POP1Q99575 1024 aaKnown RBP12.07□□□□□ -0.48
PDE6B-201ENST00000255622 SLC16A4O15374 487 aa12.06□□□□□ -0.48
PDE6B-201ENST00000255622 SHBGP04278 402 aa12.06□□□□□ -0.48
PDE6B-201ENST00000255622 RARRES1P49788 294 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms