RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 SPERTQ8NA61 448 aa8.12□□□□□ -1.11
USP29-201ENST00000254181 HPS1Q92902 700 aa8.12□□□□□ -1.11
USP29-201ENST00000254181 DCUN1D5Q9BTE7 237 aa8.12□□□□□ -1.11
USP29-201ENST00000254181 KIAA1683Q9H0B3 1180 aa8.12□□□□□ -1.11
USP29-201ENST00000254181 VTA1Q9NP79 307 aa8.12□□□□□ -1.11
USP29-201ENST00000254181 GDF3Q9NR23 364 aa8.12□□□□□ -1.11
USP29-201ENST00000254181 PCDHA13Q9Y5I0 950 aa8.12□□□□□ -1.11
USP29-201ENST00000254181 FANCAO15360 1455 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 MYOM2P54296 1465 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 SERPINB7O75635 380 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 PPARGP37231 505 aaPredicted RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 PAK1Q13153 545 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 PARP6Q2NL67 630 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 ARL13BQ3SXY8 428 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 CERKLQ49MI3 558 aaPredicted RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 TAS2R42Q7RTR8 314 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 DGLUCYQ7Z3D6 616 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 ADAT2Q7Z6V5 191 aaKnown RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 DIS3LQ8TF46 1054 aaKnown RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 PHACTR3Q96KR7 559 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 ISCUQ9H1K1 167 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 PARVGQ9HBI0 331 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 WDR6Q9NNW5 1121 aaKnown RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 GIN1Q9NXP7 522 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 VPS51Q9UID3 782 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 LAMP5Q9UJQ1 280 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 CARMIL3Q8ND23 1372 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 EPS15P42566 896 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 IFI35P80217 286 aaPredicted RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 SUZ12Q15022 739 aaKnown RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 DEPDC1Q5TB30 811 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 SHC4Q6S5L8 630 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 RGS9BPQ6ZS82 235 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 MCF2L2Q86YR7 1114 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 NUDCD3Q8IVD9 361 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 FRMD6Q96NE9 622 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 CGREF1Q99674 301 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 KLHL4Q9C0H6 718 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 ATP10DQ9P241 1426 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 PNPLA6Q8IY17 1366 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 A0A0D9SFI3 127 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 TNFRSF10AO00220 468 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 ESRRBO95718 433 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 CASP1P29466 404 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 ADCY8P40145 1251 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 MTHFRP42898 656 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 RPL5P46777 297 aaKnown RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 RAP1GDS1P52306 607 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 C21orf59P57076 290 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 GABREP78334 506 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 PLIN5Q00G26 463 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 IL9RQ01113 521 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 RASGRF1Q13972 1273 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 SEMA3AQ14563 771 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 NFE2Q16621 373 aaPredicted RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 SMU1Q2TAY7 513 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 C1orf146Q5VVC0 180 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 IYDQ6PHW0 289 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 CEP68Q76N32 757 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 G2E3Q7L622 706 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 NLRP10Q86W26 655 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 NAT8LQ8N9F0 302 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 CCDC177Q9NQR7 707 aaPredicted RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 ATPIF1Q9UII2 106 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 REXO2Q9Y3B8 237 aaKnown RBP8.11□□□□□ -1.11
USP29-201ENST00000254181 TAF6LQ9Y6J9 622 aa8.11□□□□□ -1.11
USP29-201ENST00000254181 PRDM15P57071 1507 aaPredicted RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 TMEM120BA0PK00 339 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 FAM47E-STBD1D6RA91 191 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 PFDN6O15212 129 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 RASGRP1O95267 797 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 CYP1A1P04798 512 aaPredicted RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 CTHP32929 405 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 PGM1P36871 562 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 HADHAP40939 763 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 STK11Q15831 433 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 PROSER3Q2NL68 480 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 CMPK2Q5EBM0 449 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 RESP18Q5W5W9 173 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 VPS37DQ86XT2 251 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 RFWD2Q8NHY2 731 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 PI4K2BQ8TCG2 481 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 ZNF317Q96PQ6 595 aaPredicted RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 PPP1R10Q96QC0 940 aaKnown RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 ECSITQ9BQ95 431 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 HAUS8Q9BT25 410 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 MRPL9Q9BYD2 267 aaKnown RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 TCF7L2Q9NQB0 619 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 PIH1D3Q9NQM4 214 aaKnown RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 HSFX1Q9UBD0 423 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 PRKAG3Q9UGI9 489 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 SLC30A1Q9Y6M5 507 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 GNPATO15228 680 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 PABPC4LP0CB38 370 aaKnown RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 MX2P20592 715 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 GRK2P25098 689 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 TNFRSF8P28908 595 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 MAPK9P45984 424 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms