RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 NAP1L4Q99733 375 aaKnown RBP21.78■■□□□ 1.08
RARA-201ENST00000254066 SPATA16Q9BXB7 569 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 CCDC87Q9NVE4 849 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 TMEM260Q9NX78 707 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 CCNL1Q9UK58 526 aaPredicted RBP21.78■■□□□ 1.08
RARA-201ENST00000254066 MAST2Q6P0Q8 1798 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 SMAPO00193 183 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 ZSCAN9O15535 394 aaPredicted RBP21.78■■□□□ 1.08
RARA-201ENST00000254066 PSMG1O95456 288 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 TCERG1LQ5VWI1 586 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 NRG4Q8WWG1 115 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 BTBD10Q9BSF8 475 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 CYLDQ9NQC7 956 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 SENP1Q9P0U3 644 aa21.78■■□□□ 1.08
RARA-201ENST00000254066 SMG5Q9UPR3 1016 aaKnown RBP21.78■■□□□ 1.08
RARA-201ENST00000254066 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 CBX6O95503 412 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 ABHD2P08910 425 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 CYP19A1P11511 503 aaPredicted RBP21.77■■□□□ 1.08
RARA-201ENST00000254066 ADCY7P51828 1080 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 KIF22Q14807 665 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 DRAP1Q14919 205 aaPredicted RBP21.77■■□□□ 1.08
RARA-201ENST00000254066 CNPY1Q3B7I2 92 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 RASIP1Q5U651 963 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 ZNF444Q8N0Y2 327 aaPredicted RBP21.77■■□□□ 1.08
RARA-201ENST00000254066 CD101Q93033 1021 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 OLFM3Q96PB7 478 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 CENPKQ9BS16 269 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 A8MXQ7 604 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 ZBTB7AO95365 584 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 RFX1P22670 979 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 DNAJC3Q13217 504 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 LSAMPQ13449 338 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 TAF1BQ53T94 588 aaPredicted RBP21.77■■□□□ 1.08
RARA-201ENST00000254066 GJB7Q6PEY0 223 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 MAML1Q92585 1016 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 VTI1AQ96AJ9 217 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 PLEKHG4BQ96PX9 1271 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 ZCWPW1Q9H0M4 648 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 NINJ2Q9NZG7 142 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 PCDHA12Q9UN75 941 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 PTPN22Q9Y2R2 807 aa21.77■■□□□ 1.08
RARA-201ENST00000254066 RASA4BC9J798 803 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 E9PMD0 336 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 CAPN9O14815 690 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 RASA4O43374 803 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 NR3C1P04150 777 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 IL6STP40189 918 aaPredicted RBP21.76■■□□□ 1.07
RARA-201ENST00000254066 PTK6Q13882 451 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 KYNUQ16719 465 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 CTC1Q2NKJ3 1217 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 HAS1Q92839 578 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 PLVAPQ9BX97 442 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 CADM1Q9BY67 442 aaKnown RBP21.76■■□□□ 1.07
RARA-201ENST00000254066 DNAJC12Q9UKB3 198 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 LAMB2P55268 1798 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 USP17L3A6NCW0 530 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 USP17L4A6NCW7 530 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 SORBS3O60504 671 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 KRT18P05783 430 aaKnown RBP21.76■■□□□ 1.07
RARA-201ENST00000254066 SUSD4Q5VX71 490 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 USP17L1Q7RTZ2 530 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 CCNJLQ8IV13 435 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 MIPEPQ99797 713 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 TRAIPQ9BWF2 469 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 KIAA1024Q9UPX6 916 aa21.76■■□□□ 1.07
RARA-201ENST00000254066 A0A1W2PRG0 241 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 LYNP07948 512 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 GOLGA8HP0CJ92 632 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 PYGMP11217 842 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 CHKAP35790 457 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 SESN3P58005 492 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 GPC5P78333 572 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 KRT17Q04695 432 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 MCL1Q07820 350 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 NFIL3Q16649 462 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 TMEM63BQ5T3F8 832 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 ARMC3Q5W041 872 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 RNF207Q6ZRF8 634 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 CLNKQ7Z7G1 428 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 TDRPQ86YL5 185 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 BBOF1Q8ND07 529 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 GRK7Q8WTQ7 553 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 STMN2Q93045 179 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 SLX1AQ9BQ83 275 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 FOXP3Q9BZS1 431 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 PDGFDQ9GZP0 370 aaPredicted RBP21.75■■□□□ 1.07
RARA-201ENST00000254066 RIOX1Q9H6W3 641 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 DDX25Q9UHL0 483 aaKnown RBP21.75■■□□□ 1.07
RARA-201ENST00000254066 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 TBC1D30Q9Y2I9 924 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 USP17L8P0C7I0 530 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 SLC12A3P55017 1021 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 MYBPC3Q14896 1274 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 ACSBG2Q5FVE4 666 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 SH2D4BQ5SQS7 431 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 FYB2Q5VWT5 728 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 NLRP9Q7RTR0 991 aa21.75■■□□□ 1.07
RARA-201ENST00000254066 ASCC2Q9H1I8 757 aaPredicted RBP21.75■■□□□ 1.07
RARA-201ENST00000254066 DNAJC18Q9H819 358 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms