RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 FNIP2Q9P278 1114 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 ADAM28Q9UKQ2 775 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 DUSP12Q9UNI6 340 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 DCHS1Q96JQ0 3298 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 CACNA1IQ9P0X4 2223 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 CLUHO75153 1309 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 A0A087WWV3 80 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 MED24O75448 989 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 RFPL2O75678 378 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 NPTXRO95502 500 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 EDN1P05305 212 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 NPR3P17342 541 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 AKAP5P24588 427 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 NBL1P41271 181 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 CLCN5P51795 746 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 NCBP1Q09161 790 aaKnown RBP11.42□□□□□ -0.58
VPS50-201ENST00000251739 ORC2Q13416 577 aaPredicted RBP11.42□□□□□ -0.58
VPS50-201ENST00000251739 TDGQ13569 410 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 NAB2Q15742 525 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 HACE1Q8IYU2 909 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 MCPH1Q8NEM0 835 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 BSNDQ8WZ55 320 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 B3GALT6Q96L58 329 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 POLR3CQ9BUI4 534 aaPredicted RBP11.42□□□□□ -0.58
VPS50-201ENST00000251739 APOL6Q9BWW8 343 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 CCDC113Q9H0I3 377 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 PDZD7Q9H5P4 517 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.42□□□□□ -0.58
VPS50-201ENST00000251739 PRMT7Q9NVM4 692 aaPredicted RBP11.42□□□□□ -0.58
VPS50-201ENST00000251739 IGSF9Q9P2J2 1179 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 EPS15L1Q9UBC2 864 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 DPP7Q9UHL4 492 aa11.42□□□□□ -0.58
VPS50-201ENST00000251739 DMXL1Q9Y485 3027 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 MYH11P35749 1972 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 MIA3Q5JRA6 1907 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 CCDC195A0A1B0GUA6 201 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 LRRIQ4A6NIV6 560 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 H0Y858 1186 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 PTGESO14684 152 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
VPS50-201ENST00000251739 AOC1P19801 751 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 RPA1P27694 616 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 NEK4P51957 841 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 TUSC3Q13454 348 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 USP41Q3LFD5 358 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 ATOH1Q92858 354 aaPredicted RBP11.41□□□□□ -0.58
VPS50-201ENST00000251739 CCDC43Q96MW1 224 aaKnown RBP11.41□□□□□ -0.58
VPS50-201ENST00000251739 MYADMQ96S97 322 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 PAAF1Q9BRP4 392 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 COLEC11Q9BWP8 271 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 TRIM6Q9C030 488 aaPredicted RBP11.41□□□□□ -0.58
VPS50-201ENST00000251739 CXCL16Q9H2A7 254 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 PLEKHA4Q9H4M7 779 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 ZDHHC7Q9NXF8 308 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 GPR179Q6PRD1 2367 aa11.41□□□□□ -0.58
VPS50-201ENST00000251739 SF3B1O75533 1304 aaKnown RBP eCLIP11.4□□□□□ -0.58
VPS50-201ENST00000251739 TRIM66O15016 1216 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 TGM5O43548 720 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 GFRA3O60609 400 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 NR1I2O75469 434 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 MCM7P33993 719 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 TRIM29Q14134 588 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 HSP90AA2PQ14568 343 aaPredicted RBP11.4□□□□□ -0.58
VPS50-201ENST00000251739 RTP2Q5QGT7 225 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 ELMSAN1Q6PJG2 1045 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 PIK3R5Q8WYR1 880 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 SMG7Q92540 1137 aaKnown RBP11.4□□□□□ -0.58
VPS50-201ENST00000251739 NACC1Q96RE7 527 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 NT5C3AQ9H0P0 336 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 KLK14Q9P0G3 267 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 CACNG4Q9UBN1 327 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 FBXW11Q9UKB1 542 aa11.4□□□□□ -0.58
VPS50-201ENST00000251739 PATJQ8NI35 1801 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 PRR23AA6NEV1 266 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 ANHXE9PGG2 379 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 ACKR2O00590 384 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 N4BP3O15049 544 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 PI15O43692 258 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 NARSO43776 548 aaKnown RBP11.39□□□□□ -0.59
VPS50-201ENST00000251739 RECQL4O94761 1208 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 KIF4AO95239 1232 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 OR52Z1P0C646 297 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 SPATA31D3P0C874 917 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 RPL17P18621 184 aaKnown RBP11.39□□□□□ -0.59
VPS50-201ENST00000251739 CYP11B2P19099 503 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 MUTP22033 750 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 NAMPTP43490 491 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 CREMQ03060 361 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 EEF1DP3Q658K8 133 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 SPATA31D4Q6ZUB0 917 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 ZBTB8OSQ8IWT0 167 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 CCDC105Q8IYK2 499 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 C4orf32Q8N8J7 132 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 RIN2Q8WYP3 895 aaPredicted RBP11.39□□□□□ -0.59
VPS50-201ENST00000251739 RABGGTAQ92696 567 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 STAMQ92783 540 aa11.39□□□□□ -0.59
VPS50-201ENST00000251739 WNT2BQ93097 391 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms