RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 PTPN22Q9Y2R2 807 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 PCDHA10Q9Y5I2 948 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 TCRBV7S2A1N4TA0A589 114 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 TLDC2A0PJX2 215 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 GKAP1Q5VSY0 366 aaPredicted RBP17.59■□□□□ 0.41
HOXD3-201ENST00000249440 FBXW10Q5XX13 1052 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 CCDC121Q6ZUS5 278 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 SV2AQ7L0J3 742 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 ENOSF1Q7L5Y1 443 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 TATDN2Q93075 761 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 SEC16BQ96JE7 1060 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 FAM81BQ96LP2 452 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 LRRC19Q9H756 370 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 ZBED4O75132 1171 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 ECEL1O95672 775 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 MMP13P45452 471 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 CYP24A1Q07973 514 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 SIX1Q15475 284 aaPredicted RBP17.58■□□□□ 0.41
HOXD3-201ENST00000249440 QPCTQ16769 361 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 ICE2Q659A1 982 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 NLRX1Q86UT6 975 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 SUGP1Q8IWZ8 645 aaKnown RBP17.58■□□□□ 0.41
HOXD3-201ENST00000249440 CACNA2D3Q8IZS8 1091 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 ZBED3Q96IU2 234 aaPredicted RBP17.58■□□□□ 0.41
HOXD3-201ENST00000249440 XPO6Q96QU8 1125 aaKnown RBP17.58■□□□□ 0.41
HOXD3-201ENST00000249440 TMEM109Q9BVC6 243 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 STMN4Q9H169 189 aaPredicted RBP17.58■□□□□ 0.41
HOXD3-201ENST00000249440 VPS33BQ9H267 617 aa17.58■□□□□ 0.41
HOXD3-201ENST00000249440 VGLL3A8MV65 326 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 NFKBIEO00221 500 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 GRIN3BO60391 1043 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 AGTP01019 485 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 DLATP10515 647 aaKnown RBP17.58■□□□□ 0.4
HOXD3-201ENST00000249440 GCNT1Q02742 428 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 ENPEPQ07075 957 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 ACTN3Q08043 901 aaPredicted RBP17.58■□□□□ 0.4
HOXD3-201ENST00000249440 CALCOCO2Q13137 446 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 PLCB4Q15147 1175 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 PPP1R7Q15435 360 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 DALRD3Q5D0E6 543 aaKnown RBP17.58■□□□□ 0.4
HOXD3-201ENST00000249440 XRRA1Q6P2D8 792 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 NSMFQ6X4W1 530 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 GPD1LQ8N335 351 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 MDM1Q8TC05 714 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 CHMP6Q96FZ7 201 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 CEP170P1Q96L14 293 aa17.58■□□□□ 0.4
HOXD3-201ENST00000249440 TOPORSQ9NS56 1045 aaPredicted RBP17.58■□□□□ 0.4
HOXD3-201ENST00000249440 HNRNPDLO14979 420 aaKnown RBP17.57■□□□□ 0.4
HOXD3-201ENST00000249440 MAFGO15525 162 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 RIPK2O43353 540 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 CTNND1O60716 968 aaKnown RBP17.57■□□□□ 0.4
HOXD3-201ENST00000249440 DKC1O60832 514 aaKnown RBP eCLIP17.57■□□□□ 0.4
HOXD3-201ENST00000249440 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.4
HOXD3-201ENST00000249440 KRT5P13647 590 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 KCNJ1P48048 391 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 CLEC16AQ2KHT3 1053 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 BRDTQ58F21 947 aaPredicted RBP17.57■□□□□ 0.4
HOXD3-201ENST00000249440 SLC39A4Q6P5W5 647 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 CPNE8Q86YQ8 564 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 NIM1KQ8IY84 436 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 SLCO2A1Q92959 643 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 SENP7Q9BQF6 1050 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 GINM1Q9NU53 330 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
HOXD3-201ENST00000249440 FSCN2O14926 492 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 FDX1P10109 184 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 CHN1P15882 459 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 GARTP22102 1010 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 MAPK4P31152 587 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 HNRNPH1P31943 449 aaKnown RBP17.56■□□□□ 0.4
HOXD3-201ENST00000249440 DGKZQ13574 1117 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 PSPC1Q8WXF1 523 aaKnown RBP17.56■□□□□ 0.4
HOXD3-201ENST00000249440 BSNDQ8WZ55 320 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 DHX38Q92620 1227 aaKnown RBP17.56■□□□□ 0.4
HOXD3-201ENST00000249440 ATP6V0A1Q93050 837 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 AZI2Q9H6S1 392 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 ACTR5Q9H9F9 607 aaPredicted RBP17.56■□□□□ 0.4
HOXD3-201ENST00000249440 GABBR1Q9UBS5 961 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 ANAPC7Q9UJX3 599 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 GOLGA6L7A0A1B0GV03 622 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 FGFR4P22455 802 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 SGO2Q562F6 1265 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 MAIP1Q8WWC4 291 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 GPRASP2Q96D09 838 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 SELENOSQ9BQE4 189 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 MYOZ2Q9NPC6 264 aa17.56■□□□□ 0.4
HOXD3-201ENST00000249440 KIAA1217Q5T5P2 1943 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 SMIM23A6NLE4 172 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 CLDN3O15551 220 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 SCP2P22307 547 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 CCND2P30279 289 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 VSIG10LQ86VR7 867 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 MCPH1Q8NEM0 835 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 C1orf112Q9NSG2 853 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 RASGRF2O14827 1237 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 DGAT1O75907 488 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 MYBL1P10243 752 aa17.55■□□□□ 0.4
HOXD3-201ENST00000249440 UNGP13051 313 aaPredicted RBP17.55■□□□□ 0.4
HOXD3-201ENST00000249440 DRD4P21917 467 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms