RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CTSHP09668 335 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 STAG3L1P0CL83 205 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 RFC2P35250 354 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 ACOT2P49753 483 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 TLE2Q04725 743 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 EXOC3L4Q17RC7 722 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 DCAF17Q5H9S7 520 aaPredicted RBP14.03□□□□□ -0.16
LSM8-201ENST00000249299 KRT39Q6A163 491 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 GBP6Q6ZN66 633 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 UBE2Q1Q7Z7E8 422 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 RSPH1Q8WYR4 309 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 CPB2Q96IY4 423 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 ACAP3Q96P50 834 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 CGRRF1Q99675 332 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 TRIM6Q9C030 488 aaPredicted RBP14.03□□□□□ -0.16
LSM8-201ENST00000249299 PADI3Q9ULW8 664 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 C2CD2Q9Y426 696 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 TTC26A0AVF1 554 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 PQBP1O60828 265 aaKnown RBP14.02□□□□□ -0.17
LSM8-201ENST00000249299 TPM1P09493 284 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 RFX1P22670 979 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 YARSP54577 528 aaKnown RBP14.02□□□□□ -0.17
LSM8-201ENST00000249299 FAAP100Q0VG06 881 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 TBX2Q13207 712 aaPredicted RBP14.02□□□□□ -0.17
LSM8-201ENST00000249299 DSC3Q14574 896 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 SYCP1Q15431 976 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 ENOX2Q16206 610 aaKnown RBP14.02□□□□□ -0.17
LSM8-201ENST00000249299 DUOXA2Q1HG44 320 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 HS1BP3Q53T59 392 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 C1orf220Q5T0J3 134 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 MRPL10Q7Z7H8 261 aaKnown RBP14.02□□□□□ -0.17
LSM8-201ENST00000249299 FMNL3Q8IVF7 1028 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 DRC7Q8IY82 874 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 CACTINQ8WUQ7 758 aaKnown RBP14.02□□□□□ -0.17
LSM8-201ENST00000249299 FAXDC2Q96IV6 333 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 PAWRQ96IZ0 340 aaKnown RBP14.02□□□□□ -0.17
LSM8-201ENST00000249299 FAM81BQ96LP2 452 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 AGO3Q9H9G7 860 aaKnown RBP14.02□□□□□ -0.17
LSM8-201ENST00000249299 UBN1Q9NPG3 1134 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 TBX21Q9UL17 535 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 SIK3Q9Y2K2 1263 aa14.02□□□□□ -0.17
LSM8-201ENST00000249299 A0A0U1RQF3 1178 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 A0A1W2PQJ5 194 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 LRRIQ3A6PVS8 624 aaPredicted RBP14.01□□□□□ -0.17
LSM8-201ENST00000249299 ZC3H11AO75152 810 aaKnown RBP eCLIP14.01□□□□□ -0.17
LSM8-201ENST00000249299 CXCL10P02778 98 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 GHRP10912 638 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 FGFR4P22455 802 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 MXI1P50539 228 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 NFX1Q12986 1120 aaKnown RBP14.01□□□□□ -0.17
LSM8-201ENST00000249299 ZACNQ401N2 412 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 TRIM60Q495X7 471 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 XKR4Q5GH76 650 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 UBXN11Q5T124 520 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 TWF2Q6IBS0 349 aaKnown RBP14.01□□□□□ -0.17
LSM8-201ENST00000249299 C15orf39Q6ZRI6 1047 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 PPFIBP1Q86W92 1011 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 THNSL1Q8IYQ7 743 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 ZSWIM2Q8NEG5 633 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 PLEKHO2Q8TD55 490 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 CCDC127Q96BQ5 260 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 IFIH1Q9BYX4 1025 aaKnown RBP14.01□□□□□ -0.17
LSM8-201ENST00000249299 NUCKS1Q9H1E3 243 aaKnown RBP14.01□□□□□ -0.17
LSM8-201ENST00000249299 HIPK3Q9H422 1215 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 C1orf112Q9NSG2 853 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 MYO6Q9UM54 1294 aa14.01□□□□□ -0.17
LSM8-201ENST00000249299 TRIP12Q14669 1992 aaPredicted RBP14□□□□□ -0.17
LSM8-201ENST00000249299 NPTXRO95502 500 aa14□□□□□ -0.17
LSM8-201ENST00000249299 C4BPAP04003 597 aaKnown RBP14□□□□□ -0.17
LSM8-201ENST00000249299 CLTBP09497 229 aa14□□□□□ -0.17
LSM8-201ENST00000249299 TRIM49P0CI25 452 aa14□□□□□ -0.17
LSM8-201ENST00000249299 TRIM49CP0CI26 452 aa14□□□□□ -0.17
LSM8-201ENST00000249299 TNNI1P19237 187 aa14□□□□□ -0.17
LSM8-201ENST00000249299 TRIM21P19474 475 aaKnown RBP14□□□□□ -0.17
LSM8-201ENST00000249299 CD52P31358 61 aa14□□□□□ -0.17
LSM8-201ENST00000249299 MYL7Q01449 175 aa14□□□□□ -0.17
LSM8-201ENST00000249299 PPP3CAQ08209 521 aa14□□□□□ -0.17
LSM8-201ENST00000249299 ARID5BQ14865 1188 aa14□□□□□ -0.17
LSM8-201ENST00000249299 SLC10A6Q3KNW5 377 aa14□□□□□ -0.17
LSM8-201ENST00000249299 PLEKHG4Q58EX7 1191 aa14□□□□□ -0.17
LSM8-201ENST00000249299 ALKAL1Q6UXT8 129 aa14□□□□□ -0.17
LSM8-201ENST00000249299 SV2AQ7L0J3 742 aa14□□□□□ -0.17
LSM8-201ENST00000249299 TMC6Q7Z403 805 aa14□□□□□ -0.17
LSM8-201ENST00000249299 CNGA4Q8IV77 575 aa14□□□□□ -0.17
LSM8-201ENST00000249299 CCDC150Q8NCX0 1101 aa14□□□□□ -0.17
LSM8-201ENST00000249299 EHBP1Q8NDI1 1231 aa14□□□□□ -0.17
LSM8-201ENST00000249299 FBXL13Q8NEE6 735 aa14□□□□□ -0.17
LSM8-201ENST00000249299 ZNF397Q8NF99 534 aaPredicted RBP14□□□□□ -0.17
LSM8-201ENST00000249299 NEK11Q8NG66 645 aa14□□□□□ -0.17
LSM8-201ENST00000249299 DIS3LQ8TF46 1054 aaKnown RBP14□□□□□ -0.17
LSM8-201ENST00000249299 PGBD4Q96DM1 585 aa14□□□□□ -0.17
LSM8-201ENST00000249299 TMEM117Q9H0C3 514 aa14□□□□□ -0.17
LSM8-201ENST00000249299 PDE11AQ9HCR9 933 aa14□□□□□ -0.17
LSM8-201ENST00000249299 RGS18Q9NS28 235 aa14□□□□□ -0.17
LSM8-201ENST00000249299 FAM105AQ9NUU6 356 aa14□□□□□ -0.17
LSM8-201ENST00000249299 CNTN3Q9P232 1028 aa14□□□□□ -0.17
LSM8-201ENST00000249299 GIT1Q9Y2X7 761 aa14□□□□□ -0.17
LSM8-201ENST00000249299 KIAA0355O15063 1070 aa13.99□□□□□ -0.17
LSM8-201ENST00000249299 XPOTO43592 962 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms