RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 NLRX1Q86UT6 975 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 PSPC1Q8WXF1 523 aaKnown RBP23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 DHX38Q92620 1227 aaKnown RBP23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 CEP170P1Q96L14 293 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 GOLGB1Q14789 3259 aaKnown RBP23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 ZNF862O60290 1169 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 FSBPO95073 299 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 STBD1O95210 358 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 CDR1P51861 262 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 MTMR2Q13614 643 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 CYFIP1Q7L576 1253 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 ENOSF1Q7L5Y1 443 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 VSIG10LQ86VR7 867 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 CCDC105Q8IYK2 499 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 GPD1LQ8N335 351 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 TATDN2Q93075 761 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 CENPTQ96BT3 561 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 FAM129AQ9BZQ8 928 aa23.18■■□□□ 1.3
SH2D3A-201ENST00000245908 VWA5AO00534 786 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 GARTP22102 1010 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 MNAT1P51948 309 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 GCNT1Q02742 428 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 ART4Q93070 314 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 LRRC19Q9H756 370 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 GABBR1Q9UBS5 961 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 ADGRA3Q8IWK6 1321 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 PASKQ96RG2 1323 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 KIAA1217Q5T5P2 1943 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 ZC3H11AO75152 810 aaKnown RBP eCLIP23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 DPEP1P16444 411 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 SOX10P56693 466 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 BAATQ14032 418 aaPredicted RBP23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 SLC29A2Q14542 456 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 CROCCP2Q86T23 111 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 ATP6V0A1Q93050 837 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 TMEM109Q9BVC6 243 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 PDLIM7Q9NR12 457 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 RNF146Q9NTX7 359 aa23.17■■□□□ 1.3
SH2D3A-201ENST00000245908 TULP1O00294 542 aaPredicted RBP23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 MAFGO15525 162 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 DKC1O60832 514 aaKnown RBP eCLIP23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 RTP1P59025 263 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 PPARDQ03181 441 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 TNFAIP1Q13829 316 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 SLMAPQ14BN4 828 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 ARMC9Q7Z3E5 817 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 TAOK3Q9H2K8 898 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 SEMA4AQ9H3S1 761 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 DDX20Q9UHI6 824 aaKnown RBP23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 FSCN2O14926 492 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 NR3C2P08235 984 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 DLATP10515 647 aaKnown RBP23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 BRDTQ58F21 947 aaPredicted RBP23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 SLCO2A1Q92959 643 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 ATG4CQ96DT6 458 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 FAM81BQ96LP2 452 aa23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 A1CFQ9NQ94 594 aaKnown RBP23.16■■□□□ 1.3
SH2D3A-201ENST00000245908 HNRNPDLO14979 420 aaKnown RBP23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 RARGP13631 454 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 KCNA2P16389 499 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 ADCY2Q08462 1091 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 QPCTQ16769 361 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 CIAPIN1Q6FI81 312 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 MCPH1Q8NEM0 835 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 WNK4Q96J92 1243 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 PLVAPQ9BX97 442 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 RIPK3Q9Y572 518 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 DGAT1O75907 488 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 KRT5P13647 590 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 IFT88Q13099 833 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 ERMARDQ5T6L9 678 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 C15orf39Q6ZRI6 1047 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 ELMO3Q96BJ8 720 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 XPO6Q96QU8 1125 aaKnown RBP23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 AVENQ9NQS1 362 aaPredicted RBP23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 XPNPEP1Q9NQW7 623 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 DONSONQ9NYP3 566 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 PTPN22Q9Y2R2 807 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 CEP83Q9Y592 693 aa23.15■■□□□ 1.3
SH2D3A-201ENST00000245908 COL11A1P12107 1806 aaPredicted RBP23.14■■□□□ 1.3
SH2D3A-201ENST00000245908 ECEL1O95672 775 aa23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 UNGP13051 313 aaPredicted RBP23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 MMP13P45452 471 aa23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 KCNJ1P48048 391 aa23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 C6orf118Q5T5N4 469 aa23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 FBXW10Q5XX13 1052 aa23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 TAS1R3Q7RTX0 852 aa23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 TACO1Q9BSH4 297 aaKnown RBP23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 CAPN7Q9Y6W3 813 aa23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 DOCK1Q14185 1865 aa23.14■■□□□ 1.29
SH2D3A-201ENST00000245908 CLDN3O15551 220 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 RIPK2O43353 540 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 DRP2Q13474 957 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 UBAP2Q5T6F2 1119 aaKnown RBP23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 MDM1Q8TC05 714 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 FAM213AQ9BRX8 229 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 PI4K2AQ9BTU6 479 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 AZI2Q9H6S1 392 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 C1orf112Q9NSG2 853 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 ARHGAP28Q9P2N2 729 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms