RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 GAD1Q99259 594 aa16.97■□□□□ 0.31
RAB38-201ENST00000243662 MRPL9Q9BYD2 267 aaKnown RBP16.97■□□□□ 0.31
RAB38-201ENST00000243662 CXCL16Q9H2A7 254 aa16.97■□□□□ 0.31
RAB38-201ENST00000243662 TBC1D13Q9NVG8 400 aa16.97■□□□□ 0.31
RAB38-201ENST00000243662 RMND1Q9NWS8 449 aa16.97■□□□□ 0.31
RAB38-201ENST00000243662 MIOSQ9NXC5 875 aa16.97■□□□□ 0.31
RAB38-201ENST00000243662 R3HCC1Q9Y3T6 440 aaKnown RBP16.97■□□□□ 0.31
RAB38-201ENST00000243662 SZT2Q5T011 3432 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.31
RAB38-201ENST00000243662 GARTP22102 1010 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 KNOP1Q1ED39 458 aaKnown RBP16.96■□□□□ 0.31
RAB38-201ENST00000243662 COBLL1Q53SF7 1204 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 XKR4Q5GH76 650 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 ZBTB41Q5SVQ8 909 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 ALKAL1Q6UXT8 129 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 NELFCDQ8IXH7 590 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 LRRC43Q8N309 656 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 AOPEPQ8N6M6 819 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 CCDC94Q9BW85 323 aaPredicted RBP16.96■□□□□ 0.31
RAB38-201ENST00000243662 GBP3Q9H0R5 595 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 KCTD10Q9H3F6 313 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 ZNF576Q9H609 170 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 TYW1Q9NV66 732 aaKnown RBP16.96■□□□□ 0.31
RAB38-201ENST00000243662 KLK14Q9P0G3 267 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 IMPACTQ9P2X3 320 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 PARP2Q9UGN5 583 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 ATG2AQ2TAZ0 1938 aa16.96■□□□□ 0.31
RAB38-201ENST00000243662 PTGESO14684 152 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 B4GALT3O60512 393 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 TNFSF9P41273 254 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 OSTNP61366 133 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 DPCR1Q3MIW9 517 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 SEZ6Q53EL9 994 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 ZNF658Q5TYW1 1059 aaPredicted RBP16.95■□□□□ 0.3
RAB38-201ENST00000243662 GUF1Q8N442 669 aaKnown RBP16.95■□□□□ 0.3
RAB38-201ENST00000243662 ACAP3Q96P50 834 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 TGS1Q96RS0 853 aaKnown RBP16.95■□□□□ 0.3
RAB38-201ENST00000243662 CBWD1Q9BRT8 395 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 C17orf80Q9BSJ5 609 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 MSTO1Q9BUK6 570 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 KANSL3Q9P2N6 904 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 CPSF3Q9UKF6 684 aaKnown RBP16.95■□□□□ 0.3
RAB38-201ENST00000243662 MAN1B1Q9UKM7 699 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 AGO2Q9UKV8 859 aaKnown RBP16.95■□□□□ 0.3
RAB38-201ENST00000243662 INPP5FQ9Y2H2 1132 aa16.95■□□□□ 0.3
RAB38-201ENST00000243662 ADRB2P07550 413 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 CLTAP09496 248 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 MATR3P43243 847 aaKnown RBP eCLIP16.94■□□□□ 0.3
RAB38-201ENST00000243662 SCNN1GP51170 649 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 GSDMDP57764 484 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
RAB38-201ENST00000243662 DSC1Q08554 894 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 KYAT1Q16773 422 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 SLC10A6Q3KNW5 377 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 CRELD2Q6UXH1 353 aaPredicted RBP16.94■□□□□ 0.3
RAB38-201ENST00000243662 C12orf56Q8IXR9 622 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 POMGNT1Q8WZA1 660 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 SNX27Q96L92 541 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 SAMD11Q96NU1 681 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 AGPAT3Q9NRZ7 376 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 PLAGL2Q9UPG8 496 aa16.94■□□□□ 0.3
RAB38-201ENST00000243662 TTC26A0AVF1 554 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 C5orf67F2Z3F1 127 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 DDHD2O94830 711 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 POMCP01189 267 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 BMP6P22004 513 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 BMPR1AP36894 532 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 POU5F1Q01860 360 aaKnown RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 MORC3Q14149 939 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 NAB2Q15742 525 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 ENOX2Q16206 610 aaKnown RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 ZNF697Q5TEC3 545 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 ZNF280BQ86YH2 543 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 SMYD4Q8IYR2 804 aaPredicted RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 ZSWIM2Q8NEG5 633 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 TMEM174Q8WUU8 243 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 GTPBP4Q9BZE4 634 aaKnown RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 TOPORSQ9NS56 1045 aaPredicted RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 CNTN3Q9P232 1028 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 CGNQ9P2M7 1197 aaKnown RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 PYCARDQ9ULZ3 195 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 RWDD3Q9Y3V2 267 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 TRANK1O15050 2925 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 CDH23Q9H251 3354 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 EPOPA6NHQ4 379 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 PDXKO00764 312 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 KIAA0391O15091 583 aaKnown RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 CXCL8P10145 99 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 PRCPP42785 496 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 YARSP54577 528 aaKnown RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 GRIK3Q13003 919 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 EPC2Q52LR7 807 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 ARMCX5Q6P1M9 558 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 COLGALT1Q8NBJ5 622 aa16.93■□□□□ 0.3
RAB38-201ENST00000243662 PPP1R10Q96QC0 940 aaKnown RBP16.93■□□□□ 0.3
RAB38-201ENST00000243662 PLEKHA5Q9HAU0 1116 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms