RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 EPM2AIP1Q7L775 607 aaPredicted RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 NET1Q7Z628 596 aaPredicted RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 C14orf80Q86SX3 495 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 LRRC6Q86X45 466 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 SRRM1Q8IYB3 904 aaKnown RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 KIAA0895Q8NCT3 520 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 STARD8Q92502 1023 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 TTC1Q99614 292 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 AMFRQ9UKV5 643 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 MAGEC1O60732 1142 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 PRDM1O75626 825 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 USP1O94782 785 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 PGM1P36871 562 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 DLG1Q12959 904 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 ANKRD20A4Q4UJ75 823 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 DENND1AQ8TEH3 1009 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 PPM1HQ9ULR3 514 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 SSX2IPQ9Y2D8 614 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 COQ6Q9Y2Z9 468 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 HAUS5O94927 633 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 FGFR1OPO95684 399 aaKnown RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 BAG2O95816 211 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 RARBP10826 455 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 IL15P40933 162 aaPredicted RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 PLEKHG4Q58EX7 1191 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 TMEM63BQ5T3F8 832 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 TMCO4Q5TGY1 634 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 RFX8Q6ZV50 586 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 SPATA5Q8NB90 893 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 C18orf8Q96DM3 657 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 GPAMQ9HCL2 828 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 PCYOX1Q9UHG3 505 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 NAGPAQ9UK23 515 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 DOLKQ9UPQ8 538 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 NOX1Q9Y5S8 564 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 TACC3Q9Y6A5 838 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 ATP8B3O60423 1300 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 CFAP69A5D8W1 941 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 GOLGA8TH3BQL2 631 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 GOLGA8HP0CJ92 632 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 ALAS1P13196 640 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 XIAPP98170 497 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 PTK2Q05397 1052 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 PDK4Q16654 411 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 CCDC25Q86WR0 208 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 DNAAF5Q86Y56 855 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 ANKRD35Q8N283 1001 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 ZFRQ96KR1 1074 aaKnown RBP13.81□□□□□ -0.2
MSH2-201ENST00000233146 LSM14BQ9BX40 385 aaKnown RBP13.81□□□□□ -0.2
MSH2-201ENST00000233146 TRIM9Q9C026 710 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 SCHIP1Q9P0W5 487 aaPredicted RBP13.81□□□□□ -0.2
MSH2-201ENST00000233146 N6AMT1Q9Y5N5 214 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 C15orf38-AP3S2A0A0A6YYH1 394 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 BCAP31P51572 246 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 ACTR3P61158 418 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 WTAPQ15007 396 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 KCTD21Q4G0X4 260 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 MAP3K21Q5TCX8 1036 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 METTL21CQ5VZV1 264 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
MSH2-201ENST00000233146 OTOAQ7RTW8 1153 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 ZNF571Q7Z3V5 609 aaPredicted RBP13.81□□□□□ -0.2
MSH2-201ENST00000233146 ARPINQ7Z6K5 226 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 SLC7A5P1Q8MH63 180 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 HELBQ8NG08 1087 aaPredicted RBP13.81□□□□□ -0.2
MSH2-201ENST00000233146 PYROXD1Q8WU10 500 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 PANX3Q96QZ0 392 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 LRRC27Q9C0I9 530 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 PSTPIP2Q9H939 334 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 AAASQ9NRG9 546 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 PLK2Q9NYY3 685 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 C1orf167Q5SNV9 1468 aa13.81□□□□□ -0.2
MSH2-201ENST00000233146 CHRNA3P32297 505 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 TRMT5Q32P41 509 aaKnown RBP13.8□□□□□ -0.2
MSH2-201ENST00000233146 LMBR1LQ6UX01 489 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 RIPOR1Q6ZS17 1223 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 LRRC55Q6ZSA7 311 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 NACC2Q96BF6 587 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 FAM161BQ96MY7 647 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 CYTH2Q99418 400 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 CRNKL1Q9BZJ0 848 aaKnown RBP13.8□□□□□ -0.2
MSH2-201ENST00000233146 MRPL46Q9H2W6 279 aaKnown RBP13.8□□□□□ -0.2
MSH2-201ENST00000233146 UVRAGQ9P2Y5 699 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 NENFQ9UMX5 172 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 NAALADL1Q9UQQ1 740 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 SPECC1L-ADORA2AF8WAN1 911 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 CETPP11597 493 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 VCPP55072 806 aaKnown RBP13.8□□□□□ -0.2
MSH2-201ENST00000233146 MMEL1Q495T6 779 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 ALKBH5Q6P6C2 394 aaKnown RBP13.8□□□□□ -0.2
MSH2-201ENST00000233146 ZNF410Q86VK4 478 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 ERI1Q8IV48 349 aaKnown RBP13.8□□□□□ -0.2
MSH2-201ENST00000233146 PLIN2Q99541 437 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 C7orf25Q9BPX7 421 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms