RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PPP2R5CQ13362 524 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 MAB21L3Q8N8X9 362 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 EPS8L3Q8TE67 593 aaKnown RBP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 PRMT1Q99873 361 aaKnown RBP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZNF577Q9BSK1 485 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 GGA2Q9UJY4 613 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 PIK3CDO00329 1044 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 NFIL3Q16649 462 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 MUM1Q2TAK8 710 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 DACT2Q5SW24 774 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 C1orf220Q5T0J3 134 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 BTNL9Q6UXG8 535 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 TRPM8Q7Z2W7 1104 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 NEK9Q8TD19 979 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 CCT6BQ92526 530 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 NAF1Q96HR8 494 aaKnown RBP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 EPAS1Q99814 870 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 RHBDL2Q9NX52 303 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 DBR1Q9UK59 544 aaKnown RBP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 AGAP1Q9UPQ3 857 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 FOXO6A8MYZ6 492 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 K7ENM7 598 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 CALCAP01258 141 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 PYGBP11216 843 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 RFC5P40937 340 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 PEX5P50542 639 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 STAT2P52630 851 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 CEP55Q53EZ4 464 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 RNF220Q5VTB9 566 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 CCDC137Q6PK04 289 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 GDAP1Q8TB36 358 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 PRMT6Q96LA8 375 aaPredicted RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 NACC1Q96RE7 527 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 CSRNP1Q96S65 589 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 PCDHA3Q9Y5H8 950 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 STK24Q9Y6E0 443 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 GOLGA8IPA6NC78 632 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 GOLGA8JA6NMD2 632 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 PHF2O75151 1096 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 NQO1P15559 274 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 CHRNB2P17787 502 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 PPP1R15BQ5SWA1 713 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 RASIP1Q5U651 963 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 DENND2CQ68D51 928 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 NSMFQ6X4W1 530 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 PODNQ7Z5L7 613 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 NOP9Q86U38 636 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZNF317Q96PQ6 595 aaPredicted RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZSWIM1Q9BR11 485 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 STRA6Q9BX79 667 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 FBXO28Q9NVF7 368 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZBTB21Q9ULJ3 1066 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 LUC7L3O95232 432 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 KRT16P08779 473 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 NUDT17P0C025 328 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 POLR2MP0CAP2 368 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 EIF3BP55884 814 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 CUL3Q13618 768 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 SLC47A2Q86VL8 602 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 ATXN2LQ8WWM7 1075 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 FAM84AQ96KN4 292 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 RPS6KC1Q96S38 1066 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 FAM129AQ9BZQ8 928 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 DIS3Q9Y2L1 958 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-201ENST00000229829 ARHGEF35A5YM69 484 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 IPO5O00410 1097 aaKnown RBP10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 CYP26A1O43174 497 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 GPC5P78333 572 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 DHX34Q14147 1143 aaKnown RBP10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 NUGGCQ68CJ6 796 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZNF449Q6P9G9 518 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 PADI6Q6TGC4 694 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 VSIG1Q86XK7 387 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 NAP1L3Q99457 506 aaPredicted RBP10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 CHCHD3Q9NX63 227 aaKnown RBP10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 CORO1CQ9ULV4 474 aaPredicted RBP10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 RGS16O15492 202 aaPredicted RBP10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 ECE2O60344 883 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 BCRP11274 1271 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 NPR1P16066 1061 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 CREB1P16220 341 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 MMP13P45452 471 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 VAMP7P51809 220 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 SEPT14Q6ZU15 432 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 ARHGAP22Q7Z5H3 698 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 CDAN1Q8IWY9 1227 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 RHOT2Q8IXI1 618 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 ETNK1Q9HBU6 452 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 GPRC5CQ9NQ84 441 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 SEL1LQ9UBV2 794 aa10.04□□□□□ -0.8
HLA-DOA-201ENST00000229829 DNAJC8O75937 253 aaPredicted RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 RARAP10276 462 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CTNNA2P26232 953 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms