RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 TRANK1O15050 2925 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 DENND3A2RUS2 1198 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 A6NJR5 290 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 ZNF233A6NK53 670 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 CCDC169A6NNP5 214 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 TULP1O00294 542 aaPredicted RBP11.54□□□□□ -0.56
CDCA3-201ENST00000229265 ZNF263O14978 683 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 SLC16A4O15374 487 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 TADA3O75528 432 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 MMP3P08254 477 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 SOX5P35711 763 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 POLGP54098 1239 aaPredicted RBP11.54□□□□□ -0.56
CDCA3-201ENST00000229265 AMPD2Q01433 879 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 PRKCEQ02156 737 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 LAMC2Q13753 1193 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 TTLL4Q14679 1199 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 MBTPS1Q14703 1052 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 SURF1Q15526 300 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 HSDL1Q3SXM5 330 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 UTP14CQ5TAP6 766 aaKnown RBP11.54□□□□□ -0.56
CDCA3-201ENST00000229265 KRT39Q6A163 491 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 ZPBP2Q6X784 338 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 ZNF365Q70YC5 407 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 CCDC60Q8IWA6 550 aaPredicted RBP11.54□□□□□ -0.56
CDCA3-201ENST00000229265 USP38Q8NB14 1042 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 LMO3Q8TAP4 145 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 SCFD2Q8WU76 684 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 HNRNPLLQ8WVV9 542 aaKnown RBP11.54□□□□□ -0.56
CDCA3-201ENST00000229265 RUBCNQ92622 972 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 EMID1Q96A84 441 aaPredicted RBP11.54□□□□□ -0.56
CDCA3-201ENST00000229265 FAXDC2Q96IV6 333 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 GLT1D1Q96MS3 346 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 CRACR2AQ9BSW2 395 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 CARD6Q9BX69 1037 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 SMARCAD1Q9H4L7 1026 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 NLRC4Q9NPP4 1024 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 GCNT4Q9P109 453 aa11.54□□□□□ -0.56
CDCA3-201ENST00000229265 YBX2Q9Y2T7 364 aaKnown RBP11.54□□□□□ -0.56
CDCA3-201ENST00000229265 IGKV6-21A0A0C4DH24 114 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 CTAGE15A4D2H0 777 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 K7ERI5 159 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 EXTL3O43909 919 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 HBP1O60381 514 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 CTAGE8P0CG41 777 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 RAG1P15918 1043 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 ATP4AP20648 1035 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 GPC3P51654 580 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 RABGGTBP53611 331 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 MFAP3P55082 362 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 CDC42EP1Q00587 391 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 RAPGEF1Q13905 1077 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 CLUL1Q15846 466 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 EPC2Q52LR7 807 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 TDRD12Q587J7 1177 aaKnown RBP11.53□□□□□ -0.56
CDCA3-201ENST00000229265 MFSD5Q6N075 450 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 PPP1R2P3Q6NXS1 205 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 ZNF572Q7Z3I7 529 aaPredicted RBP11.53□□□□□ -0.56
CDCA3-201ENST00000229265 CTAGE6Q86UF2 777 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 TRIM50Q86XT4 487 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 CTAGE4Q8IX94 777 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 GPD1LQ8N335 351 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 SLC30A5Q8TAD4 765 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 LBHD1Q9BQE6 289 aaPredicted RBP11.53□□□□□ -0.56
CDCA3-201ENST00000229265 IRX2Q9BZI1 471 aaPredicted RBP11.53□□□□□ -0.56
CDCA3-201ENST00000229265 LACRTQ9GZZ8 138 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 C2orf40Q9H1Z8 148 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 TMEM8AQ9HCN3 771 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 DNAJC12Q9UKB3 198 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 EMSYQ7Z589 1322 aa11.53□□□□□ -0.56
CDCA3-201ENST00000229265 FANCGO15287 622 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 MAGEB2O15479 319 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 GZMAP12544 262 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 H2AFXP16104 143 aaPredicted RBP11.52□□□□□ -0.57
CDCA3-201ENST00000229265 UBA1P22314 1058 aaKnown RBP11.52□□□□□ -0.57
CDCA3-201ENST00000229265 CYP2J2P51589 502 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 CHMP4BP1P59074 171 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 BPIFB4P59827 614 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 MYL7Q01449 175 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 FPGSQ05932 587 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 GRIN2CQ14957 1233 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 EMC2Q15006 297 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 BRD3Q15059 726 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 SNRNP35Q16560 246 aaKnown RBP11.52□□□□□ -0.57
CDCA3-201ENST00000229265 TRIM71Q2Q1W2 868 aaKnown RBP11.52□□□□□ -0.57
CDCA3-201ENST00000229265 ZNF484Q5JVG2 852 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 ALKBH5Q6P6C2 394 aaKnown RBP11.52□□□□□ -0.57
CDCA3-201ENST00000229265 SYCE1Q8N0S2 351 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 PCSK9Q8NBP7 692 aaKnown RBP11.52□□□□□ -0.57
CDCA3-201ENST00000229265 MYLIPQ8WY64 445 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 NFKBIZQ9BYH8 718 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 INTS2Q9H0H0 1204 aaKnown RBP11.52□□□□□ -0.57
CDCA3-201ENST00000229265 AP5M1Q9H0R1 490 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 XPNPEP1Q9NQW7 623 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 PRDM6Q9NQX0 595 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
CDCA3-201ENST00000229265 ADAMTS1Q9UHI8 967 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 NAGPAQ9UK23 515 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 Q9Y3F1 56 aa11.52□□□□□ -0.57
CDCA3-201ENST00000229265 EPOPA6NHQ4 379 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms