RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 RIPK1Q13546 671 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 DYDC1Q8WWB3 177 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 POP1Q99575 1024 aaKnown RBP18.71■□□□□ 0.59
PRPF19-201ENST00000227524 CBWD1Q9BRT8 395 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 TEKT3Q9BXF9 490 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 TMEM206Q9H813 350 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 USP15Q9Y4E8 981 aaPredicted RBP18.71■□□□□ 0.59
PRPF19-201ENST00000227524 UBOX5O94941 541 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 DLATP10515 647 aaKnown RBP18.71■□□□□ 0.59
PRPF19-201ENST00000227524 CAP2P40123 477 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 FMO1Q01740 532 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 RASA3Q14644 834 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 LRRC14Q15048 493 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 TLDC1Q6P9B6 456 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 B3GNT9Q6UX72 402 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 MAEAQ7L5Y9 396 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 OTUD6AQ7L8S5 288 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 SAMD7Q7Z3H4 446 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 TEX2Q8IWB9 1127 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 C12orf56Q8IXR9 622 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 MGARPQ8TDB4 240 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 ZNF653Q96CK0 615 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 KREMEN1Q96MU8 473 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 SERPINB12Q96P63 405 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 WHRNQ9P202 907 aa18.71■□□□□ 0.59
PRPF19-201ENST00000227524 TP73O15350 636 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 ACSL3O95573 720 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 CLTAP09496 248 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 STAT2P52630 851 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 NCALDP61601 193 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 KRT17Q04695 432 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 PADI6Q6TGC4 694 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 VSTM1Q6UX27 236 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 SLC47A2Q86VL8 602 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 MICALL2Q8IY33 904 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 ZSWIM2Q8NEG5 633 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 TMEM174Q8WUU8 243 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 PSPC1Q8WXF1 523 aaKnown RBP18.7■□□□□ 0.58
PRPF19-201ENST00000227524 SLCO2A1Q92959 643 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 ARHGEF2Q92974 986 aaKnown RBP18.7■□□□□ 0.58
PRPF19-201ENST00000227524 TBC1D31Q96DN5 1066 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 ACCSQ96QU6 501 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 ACP6Q9NPH0 428 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 FGFR1OP2Q9NVK5 253 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 GTF3C4Q9UKN8 822 aa18.7■□□□□ 0.58
PRPF19-201ENST00000227524 TMEM120BA0PK00 339 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 TCP11X1B4DZS4 312 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 CYP26A1O43174 497 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 MXI1P50539 228 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 TRAF1Q13077 416 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 ALCAMQ13740 583 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 RHBDF2Q6PJF5 856 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 CRELD2Q6UXH1 353 aaPredicted RBP18.69■□□□□ 0.58
PRPF19-201ENST00000227524 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
PRPF19-201ENST00000227524 XXYLT1Q8NBI6 393 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 GLIS2Q9BZE0 524 aaPredicted RBP18.69■□□□□ 0.58
PRPF19-201ENST00000227524 TMEM117Q9H0C3 514 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 EHMT1Q9H9B1 1298 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.69■□□□□ 0.583e-6■■■■□ 23.3
PRPF19-201ENST00000227524 HSPBP1Q9NZL4 362 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 UVRAGQ9P2Y5 699 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 USP20Q9Y2K6 914 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 ZNF541Q9H0D2 1346 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 CLDN3O15551 220 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 MAPTP10636 758 aaKnown RBP18.69■□□□□ 0.58
PRPF19-201ENST00000227524 NQO1P15559 274 aaKnown RBP18.69■□□□□ 0.58
PRPF19-201ENST00000227524 CREB1P16220 341 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 CHKAP35790 457 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 CCDC174Q6PII3 467 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 C1orf54Q8WWF1 131 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 ARHGEF10LQ9HCE6 1279 aa18.69■□□□□ 0.58
PRPF19-201ENST00000227524 FSCN2O14926 492 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 ATP5DP30049 168 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 MKRN4PQ13434 485 aaPredicted RBP18.68■□□□□ 0.58
PRPF19-201ENST00000227524 GALNTL6Q49A17 601 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 SGO2Q562F6 1265 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 NSMFQ6X4W1 530 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 PPM1KQ8N3J5 372 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 SHC3Q92529 594 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 ECT2Q9H8V3 914 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 DONSONQ9NYP3 566 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 LARSQ9P2J5 1176 aaKnown RBP18.68■□□□□ 0.58
PRPF19-201ENST00000227524 GGT7Q9UJ14 662 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 SUN1O94901 812 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 ASIC3Q9UHC3 531 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 GJA3Q9Y6H8 435 aa18.68■□□□□ 0.58
PRPF19-201ENST00000227524 DDX39AO00148 427 aaKnown RBP18.67■□□□□ 0.58
PRPF19-201ENST00000227524 IPO5O00410 1097 aaKnown RBP18.67■□□□□ 0.58
PRPF19-201ENST00000227524 MAPK13O15264 365 aa18.67■□□□□ 0.58
PRPF19-201ENST00000227524 PMM2O15305 246 aa18.67■□□□□ 0.58
PRPF19-201ENST00000227524 KCNJ2P63252 427 aa18.67■□□□□ 0.58
PRPF19-201ENST00000227524 SNX1Q13596 522 aa18.67■□□□□ 0.58
PRPF19-201ENST00000227524 ZNF268Q14587 947 aaPredicted RBP18.67■□□□□ 0.58
PRPF19-201ENST00000227524 LLGL1Q15334 1064 aa18.67■□□□□ 0.58
PRPF19-201ENST00000227524 ACCSLQ4AC99 568 aa18.67■□□□□ 0.58
PRPF19-201ENST00000227524 TBC1D10BQ4KMP7 808 aaPredicted RBP18.67■□□□□ 0.58
PRPF19-201ENST00000227524 CTNNAL1Q9UBT7 734 aa18.67■□□□□ 0.58
PRPF19-201ENST00000227524 ADRB2P07550 413 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 ITIH2P19823 946 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 MFAP3P55082 362 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms