RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CYP26B1Q9NR63 512 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 C1orf112Q9NSG2 853 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 GRHL1Q9NZI5 618 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 COL11A1P12107 1806 aaPredicted RBP23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 SPATA31C2B4DYI2 1134 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 HPDP32754 393 aaPredicted RBP23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 COILP38432 576 aaPredicted RBP23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 XKR3Q5GH77 459 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 ABHD15Q6UXT9 468 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 SLCO2A1Q92959 643 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 C18orf8Q96DM3 657 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 XPNPEP1Q9NQW7 623 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 TOPORSQ9NS56 1045 aaPredicted RBP23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 CNOT8Q9UFF9 292 aaKnown RBP23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 HACL1Q9UJ83 578 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 SNX24Q9Y343 169 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 COPB2P35606 906 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 SLMAPQ14BN4 828 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 PSMD6Q15008 389 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 ODF2Q5BJF6 829 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 MYCBPAPQ8TBZ2 947 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 ZNF473Q8WTR7 871 aaKnown RBP23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 BICD1Q96G01 975 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 CCT8L2Q96SF2 557 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 POLR3FQ9H1D9 316 aaPredicted RBP23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 LRRC19Q9H756 370 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 SEPT9Q9UHD8 586 aaPredicted RBP23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 NOVA2Q9UNW9 492 aaKnown RBP23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 SCAF8Q9UPN6 1271 aaKnown RBP23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 STYXL1Q9Y6J8 313 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 PASKQ96RG2 1323 aa23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 ZNFX1Q9P2E3 1918 aaKnown RBP23.55■■□□□ 1.36
SMARCD2-201ENST00000225742 ATMINO43313 823 aaPredicted RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 PTPRAP18433 802 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 SLC1A1P43005 524 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 PLTPP55058 493 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 ACTR2P61160 394 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 PRKCEQ02156 737 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 TBC1D10BQ4KMP7 808 aaPredicted RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 WDR44Q5JSH3 913 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 DENND2CQ68D51 928 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 AADACL2Q6P093 401 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 TRMT1LQ7Z2T5 733 aaKnown RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 YTHDF3Q7Z739 585 aaKnown RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 TADA2BQ86TJ2 420 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 TATDN2Q93075 761 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 WNK4Q96J92 1243 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 TMEM109Q9BVC6 243 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 ACAD9Q9H845 621 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 BCCIPQ9P287 314 aaKnown RBP eCLIP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 ZNF214Q9UL59 606 aaPredicted RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 ADGRA3Q8IWK6 1321 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 FSCN2O14926 492 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 RGS20O76081 388 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 EGFRP00533 1210 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 KRT5P13647 590 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 BYSLQ13895 437 aaKnown RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 SIX1Q15475 284 aaPredicted RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 SKIDA1Q1XH10 827 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 NBPF12Q5TAG4 269 aaPredicted RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 PPP1R2P3Q6NXS1 205 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 TTC27Q6P3X3 843 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 PSPC1Q8WXF1 523 aaKnown RBP23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 PGM2Q96G03 612 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 FAM213AQ9BRX8 229 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 TEX13BQ9BXU2 312 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 PCDHB2Q9Y5E7 798 aa23.54■■□□□ 1.36
SMARCD2-201ENST00000225742 GMNCA6NCL1 334 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 PIGRP01833 764 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 SUPT20HL2P0C7V6 817 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 DLATP10515 647 aaKnown RBP23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 UNGP13051 313 aaPredicted RBP23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 RPL21P46778 160 aaKnown RBP23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 SUPT20HL1Q3ZLR7 823 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 SLFN12LQ6IEE8 588 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 TAS1R3Q7RTX0 852 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 MICALL2Q8IY33 904 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 ZDHHC14Q8IZN3 488 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 FBXO25Q8TCJ0 367 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 CENPTQ96BT3 561 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 EPB41L4BQ9H329 900 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 ACP6Q9NPH0 428 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 CYP39A1Q9NYL5 469 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 MYPNQ86TC9 1320 aa23.53■■□□□ 1.36
SMARCD2-201ENST00000225742 KIAA0754O94854 1291 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 RARAP10276 462 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 MAN1A1P33908 653 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 LIG4P49917 911 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 STRN3Q13033 797 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 TRIM72Q6ZMU5 477 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 SYDE1Q6ZW31 735 aaPredicted RBP23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 CCDC60Q8IWA6 550 aaPredicted RBP23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 CCDC105Q8IYK2 499 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 ART4Q93070 314 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 RABEP2Q9H5N1 569 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 MAPK4P31152 587 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 ICAM3P32942 547 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 GMPSP49915 693 aaPredicted RBP23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 MAGOHP61326 146 aaKnown RBP23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 ZACNQ401N2 412 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms