RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 CHN1P15882 459 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 CTNNA2P26232 953 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 RXRBP28702 533 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 SF3B2Q13435 895 aaKnown RBP15.66■□□□□ 0.1
CNOT3-201ENST00000221232 AGBL2Q5U5Z8 902 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 EMC10Q5UCC4 262 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 ACAD10Q6JQN1 1059 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 CCDC50Q8IVM0 306 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 CD101Q93033 1021 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 RPS6KC1Q96S38 1066 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 DEFB129Q9H1M3 183 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 MLXIPLQ9NP71 852 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 ASIC3Q9UHC3 531 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 PCDHA3Q9Y5H8 950 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 GRIN3BO60391 1043 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 RGS20O76081 388 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 LYPLA2O95372 231 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 ADCY1Q08828 1119 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 FSTL1Q12841 308 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 SPRED3Q2MJR0 410 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 SGO2Q562F6 1265 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 ZBTB41Q5SVQ8 909 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 ZFYVE27Q5T4F4 411 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 FKBP1CQ5VVH2 108 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 DDX1Q92499 740 aaKnown RBP15.65■□□□□ 0.1
CNOT3-201ENST00000221232 KIFAP3Q92845 792 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 CABS1Q96KC9 395 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 POLR3FQ9H1D9 316 aaPredicted RBP15.65■□□□□ 0.1
CNOT3-201ENST00000221232 KLHL11Q9NVR0 708 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 ANKFY1Q9P2R3 1169 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 KCNG1Q9UIX4 513 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 ATP8B3O60423 1300 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 COL2A1P02458 1487 aaPredicted RBP15.65■□□□□ 0.1
CNOT3-201ENST00000221232 CYP1A2P05177 515 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 LIG4P49917 911 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 GPC3P51654 580 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 NLRP11P59045 1033 aaKnown RBP15.65■□□□□ 0.1
CNOT3-201ENST00000221232 LONRF1Q17RB8 773 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 DEFB132Q7Z7B7 95 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 VSIG10LQ86VR7 867 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 GPD1LQ8N335 351 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 CCDC114Q96M63 670 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 FNBP1Q96RU3 617 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 CEP89Q96ST8 783 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 XPNPEP1Q9NQW7 623 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 ANKEF1Q9NU02 776 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 MTRF1LQ9UGC7 380 aaKnown RBP15.65■□□□□ 0.1
CNOT3-201ENST00000221232 BRD2P25440 801 aaKnown RBP15.65■□□□□ 0.1
CNOT3-201ENST00000221232 PRKCEQ02156 737 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 LRRC14Q15048 493 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 TAS1R3Q7RTX0 852 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 C1orf131Q8NDD1 294 aaKnown RBP15.65■□□□□ 0.1
CNOT3-201ENST00000221232 SEC16BQ96JE7 1060 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 MTFR1LQ9H019 292 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 GTF3C4Q9UKN8 822 aa15.65■□□□□ 0.1
CNOT3-201ENST00000221232 LRRIQ4A6NIV6 560 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 CCND2P30279 289 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 SFNP31947 248 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 SIX1Q15475 284 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-201ENST00000221232 PPP2R5EQ16537 467 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 MICALCLQ6ZW33 695 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 TAX1BP1Q86VP1 789 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 ZNF526Q8TF50 670 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-201ENST00000221232 C11orf70Q9BRQ4 267 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 HACL1Q9UJ83 578 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 GOLGA6L7A0A1B0GV03 622 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 PODXLO00592 558 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 ECEL1O95672 775 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 CHKAP35790 457 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 HADHBP55084 474 aaKnown RBP15.64■□□□□ 0.09
CNOT3-201ENST00000221232 KRT17Q04695 432 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 SLC20A2Q08357 652 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 HOOK3Q86VS8 718 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 FAM212AQ96EL1 285 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 ZNF668Q96K58 619 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-201ENST00000221232 MFSD14AQ96MC6 490 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 WRNIP1Q96S55 665 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 C1orf112Q9NSG2 853 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 PCYOX1Q9UHG3 505 aa15.64■□□□□ 0.09
CNOT3-201ENST00000221232 CREB1P16220 341 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 IBSPP21815 317 aaPredicted RBP15.63■□□□□ 0.09
CNOT3-201ENST00000221232 ACTR2P61160 394 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 SP2Q02086 613 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 CLEC16AQ2KHT3 1053 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 PRMT1Q99873 361 aaKnown RBP15.63■□□□□ 0.09
CNOT3-201ENST00000221232 ST6GALNAC4Q9H4F1 302 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 JPH1Q9HDC5 661 aaPredicted RBP15.63■□□□□ 0.09
CNOT3-201ENST00000221232 CYP26B1Q9NR63 512 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 R3HDM2Q9Y2K5 976 aaKnown RBP15.63■□□□□ 0.09
CNOT3-201ENST00000221232 PTPRJQ12913 1337 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 PIK3CAP42336 1068 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 CALCOCO2Q13137 446 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 TMEM270Q6UE05 265 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 DLK2Q6UY11 383 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 SEPT14Q6ZU15 432 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 CCDC121Q6ZUS5 278 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 MICALL2Q8IY33 904 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 IFT74Q96LB3 600 aa15.63■□□□□ 0.09
CNOT3-201ENST00000221232 XPO6Q96QU8 1125 aaKnown RBP15.63■□□□□ 0.09
CNOT3-201ENST00000221232 HLA-DRAP01903 254 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms