RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 DAAM2Q86T65 1068 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 AGGF1Q8N302 714 aaeCLIP14.53□□□□□ -0.08
GABPB1-201ENST00000220429 TTC8Q8TAM2 541 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 NAT14Q8WUY8 206 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 CRYGNQ8WXF5 182 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 GMCL1Q96IK5 515 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 MBOAT7Q96N66 472 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 OLFM3Q96PB7 478 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 NAP1L4Q99733 375 aaKnown RBP14.53□□□□□ -0.08
GABPB1-201ENST00000220429 DPH5Q9H2P9 285 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 AGPAT5Q9NUQ2 364 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 SPO11Q9Y5K1 396 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 STK24Q9Y6E0 443 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 CYP3A7-CYP3A51PA0A087WV96 503 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 LYNP07948 512 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 ZCCHC18P0CG32 403 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 PYGMP11217 842 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 VAV1P15498 845 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 TAL1P17542 331 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-201ENST00000220429 CYP3A7P24462 503 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 SERPINB3P29508 390 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 TNNC1P63316 161 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 TMEM259Q4ZIN3 620 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 SNX30Q5VWJ9 437 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 CYP4X1Q8N118 509 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 MPP4Q96JB8 637 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 TXLNGQ9NUQ3 528 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.53□□□□□ -0.087e-7■■□□□ 14.1
GABPB1-201ENST00000220429 PCDHA13Q9Y5I0 950 aa14.53□□□□□ -0.08
GABPB1-201ENST00000220429 GRID2IPA4D2P6 1211 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 BIRC5O15392 142 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 PORP16435 677 aaPredicted RBP14.52□□□□□ -0.08
GABPB1-201ENST00000220429 EIF3BP55884 814 aaKnown RBP14.52□□□□□ -0.08
GABPB1-201ENST00000220429 LRRC41Q15345 812 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 CCDC6Q16204 474 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 ZNF362Q5T0B9 420 aaPredicted RBP14.52□□□□□ -0.08
GABPB1-201ENST00000220429 CCDC42Q96M95 316 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 CSRNP1Q96S65 589 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 SRPK1Q96SB4 655 aaKnown RBP14.52□□□□□ -0.08
GABPB1-201ENST00000220429 AMNQ9BXJ7 453 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 LRRC27Q9C0I9 530 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 LRMDAQ9H2I8 198 aa14.52□□□□□ -0.08
GABPB1-201ENST00000220429 A0A1W2PRG0 241 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 E9PMD0 336 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 BOLA2-SMG1P6H3BVE0 249 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
GABPB1-201ENST00000220429 FLT3P36888 993 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 NEK2P51955 445 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 GEMIN4P57678 1058 aaKnown RBP14.52□□□□□ -0.09
GABPB1-201ENST00000220429 AP3B2Q13367 1082 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 DDX42Q86XP3 938 aaKnown RBP eCLIP14.52□□□□□ -0.09
GABPB1-201ENST00000220429 KLHL7Q8IXQ5 586 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 CLIP3Q96DZ5 547 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 ERGIC2Q96RQ1 377 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 NEUROG2Q9H2A3 272 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 COL2A1P02458 1487 aaPredicted RBP14.52□□□□□ -0.09
GABPB1-201ENST00000220429 KDM3AQ9Y4C1 1321 aa14.52□□□□□ -0.09
GABPB1-201ENST00000220429 POTEB3A0JP26 581 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 A6NJR5 290 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 POTECB2RU33 542 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 ENTPD5O75356 428 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 ASMTLO95671 621 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 LDHAP00338 332 aaKnown RBP14.51□□□□□ -0.09
GABPB1-201ENST00000220429 STIP1P31948 543 aaKnown RBP14.51□□□□□ -0.09
GABPB1-201ENST00000220429 CDK7P50613 346 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 ARHGAP4P98171 946 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 COASYQ13057 564 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 SH3D19Q5HYK7 790 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 KLHDC7AQ5VTJ3 777 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 PHLDB3Q6NSJ2 640 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 POTEBQ6S5H4 581 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 FBXO11Q86XK2 927 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 CFAP61Q8NHU2 1237 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 FBXO41Q8TF61 875 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 NT5C3AQ9H0P0 336 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 KIAA1024Q9UPX6 916 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 WDR46O15213 610 aaKnown RBP14.51□□□□□ -0.09
GABPB1-201ENST00000220429 MAGEB3O15480 346 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 PDGFRBP09619 1106 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 BMP3P12645 472 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 STAT3P40763 770 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 IKQ13123 557 aaPredicted RBP14.51□□□□□ -0.09
GABPB1-201ENST00000220429 MOXD1Q6UVY6 613 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 TMC3Q7Z5M5 1100 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 TUBGCP5Q96RT8 1024 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 FGFR1OP2Q9NVK5 253 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 USP20Q9Y2K6 914 aa14.51□□□□□ -0.09
GABPB1-201ENST00000220429 ALDH2P05091 517 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 NFKBIAP25963 317 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 LRRC63Q05C16 580 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 LRRC55Q6ZSA7 311 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 FAM47EQ6ZV65 393 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 RIBC1Q8N443 379 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-201ENST00000220429 ETNPPLQ8TBG4 499 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 DQX1Q8TE96 717 aaKnown RBP14.5□□□□□ -0.09
GABPB1-201ENST00000220429 TBC1D30Q9Y2I9 924 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 HGSO14964 777 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-201ENST00000220429 GALK1P51570 392 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 SPIRE1Q08AE8 756 aa14.5□□□□□ -0.09
GABPB1-201ENST00000220429 R3HDM1Q15032 1099 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms