RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 FAM212AQ96EL1 285 aa28.99■■■□□ 2.23
STUB1-201ENST00000219548 PCDHA11Q9Y5I1 949 aa28.99■■■□□ 2.23
STUB1-201ENST00000219548 TULP1O00294 542 aaPredicted RBP28.98■■■□□ 2.23
STUB1-201ENST00000219548 PTGESO14684 152 aa28.98■■■□□ 2.23
STUB1-201ENST00000219548 CASP4P49662 377 aa28.98■■■□□ 2.23
STUB1-201ENST00000219548 LRRC63Q05C16 580 aa28.98■■■□□ 2.23
STUB1-201ENST00000219548 EDRF1Q3B7T1 1238 aa28.98■■■□□ 2.23
STUB1-201ENST00000219548 LRRC55Q6ZSA7 311 aa28.98■■■□□ 2.23
STUB1-201ENST00000219548 SP7Q8TDD2 431 aaPredicted RBP28.98■■■□□ 2.23
STUB1-201ENST00000219548 FBXL18Q96ME1 805 aa28.98■■■□□ 2.23
STUB1-201ENST00000219548 TBC1D13Q9NVG8 400 aa28.98■■■□□ 2.23
STUB1-201ENST00000219548 RBAKQ9NYW8 714 aaPredicted RBP28.98■■■□□ 2.23
STUB1-201ENST00000219548 CDH23Q9H251 3354 aa28.98■■■□□ 2.23
STUB1-201ENST00000219548 TTC26A0AVF1 554 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 INPPL1O15357 1258 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 ARHGEF15O94989 841 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 CA3P07451 260 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 ADRB2P07550 413 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 WNT7BP56706 349 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 TYRO3Q06418 890 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 SPAG1Q07617 926 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 SNRNP35Q16560 246 aaKnown RBP28.97■■■□□ 2.23
STUB1-201ENST00000219548 STX1AQ16623 288 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 NFIL3Q16649 462 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 ZSCAN23Q3MJ62 389 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 LRIT3Q3SXY7 679 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 CEP135Q66GS9 1140 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 TTI2Q6NXR4 508 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 ALKAL1Q6UXT8 129 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 LRRC43Q8N309 656 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 MYO9BQ13459 2157 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 LACTBL1A8MY62 500 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 PPP2R3AQ06190 1150 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 ADAM9Q13443 819 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 BRSK2Q8IWQ3 736 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 TMEM174Q8WUU8 243 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 ZMAT2Q96NC0 199 aaKnown RBP28.97■■■□□ 2.23
STUB1-201ENST00000219548 MED15Q96RN5 788 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 DUSP9Q99956 384 aaKnown RBP28.97■■■□□ 2.23
STUB1-201ENST00000219548 ANO10Q9NW15 660 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 CNTN3Q9P232 1028 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 DACH1Q9UI36 760 aa28.97■■■□□ 2.23
STUB1-201ENST00000219548 MRPL42Q9Y6G3 142 aaKnown RBP28.97■■■□□ 2.23
STUB1-201ENST00000219548 BICDL2A1A5D9 508 aa28.96■■■□□ 2.23
STUB1-201ENST00000219548 ZNF233A6NK53 670 aa28.96■■■□□ 2.23
STUB1-201ENST00000219548 B4GALT3O60512 393 aa28.96■■■□□ 2.23
STUB1-201ENST00000219548 LETM1O95202 739 aaPredicted RBP28.96■■■□□ 2.23
STUB1-201ENST00000219548 RPL13P26373 211 aaKnown RBP28.96■■■□□ 2.23
STUB1-201ENST00000219548 SMAD3P84022 425 aaKnown RBP28.96■■■□□ 2.23
STUB1-201ENST00000219548 RAB30Q15771 203 aa28.96■■■□□ 2.23
STUB1-201ENST00000219548 XKR4Q5GH76 650 aa28.96■■■□□ 2.23
STUB1-201ENST00000219548 C11orf57Q6ZUT1 292 aaPredicted RBP28.96■■■□□ 2.23
STUB1-201ENST00000219548 MRPL9Q9BYD2 267 aaKnown RBP28.96■■■□□ 2.23
STUB1-201ENST00000219548 NKX2-4Q9H2Z4 354 aa28.96■■■□□ 2.23
STUB1-201ENST00000219548 KIAA1586Q9HCI6 787 aa28.96■■■□□ 2.23
STUB1-201ENST00000219548 MSRAQ9UJ68 235 aa28.96■■■□□ 2.23
STUB1-201ENST00000219548 SMIM28A0A1B0GU29 152 aa28.95■■■□□ 2.22
STUB1-201ENST00000219548 DNAJB2P25686 324 aa28.95■■■□□ 2.22
STUB1-201ENST00000219548 RNASELQ05823 741 aaKnown RBP28.95■■■□□ 2.22
STUB1-201ENST00000219548 MYBPC2Q14324 1141 aa28.95■■■□□ 2.22
STUB1-201ENST00000219548 ZNF280BQ86YH2 543 aa28.95■■■□□ 2.22
STUB1-201ENST00000219548 FIBCD1Q8N539 461 aa28.95■■■□□ 2.22
STUB1-201ENST00000219548 PLEKHA5Q9HAU0 1116 aa28.95■■■□□ 2.22
STUB1-201ENST00000219548 RWDD2AQ9UIY3 292 aa28.95■■■□□ 2.22
STUB1-201ENST00000219548 LINC01553A4QN01 128 aa28.94■■■□□ 2.22
STUB1-201ENST00000219548 GRIK3Q13003 919 aa28.94■■■□□ 2.22
STUB1-201ENST00000219548 SPRED2Q7Z698 418 aa28.94■■■□□ 2.22
STUB1-201ENST00000219548 CWH43Q9H720 699 aa28.94■■■□□ 2.22
STUB1-201ENST00000219548 PDE11AQ9HCR9 933 aa28.94■■■□□ 2.22
STUB1-201ENST00000219548 KANSL3Q9P2N6 904 aa28.94■■■□□ 2.22
STUB1-201ENST00000219548 AKAP3O75969 853 aa28.93■■■□□ 2.22
STUB1-201ENST00000219548 DDHD2O94830 711 aa28.93■■■□□ 2.22
STUB1-201ENST00000219548 KCNE1P15382 129 aa28.93■■■□□ 2.22
STUB1-201ENST00000219548 FKBP3Q00688 224 aaKnown RBP28.93■■■□□ 2.22
STUB1-201ENST00000219548 JADE1Q6IE81 842 aa28.93■■■□□ 2.22
STUB1-201ENST00000219548 ZC3H3Q8IXZ2 948 aaKnown RBP28.93■■■□□ 2.22
STUB1-201ENST00000219548 RSPH1Q8WYR4 309 aa28.93■■■□□ 2.22
STUB1-201ENST00000219548 PPP1R10Q96QC0 940 aaKnown RBP28.93■■■□□ 2.22
STUB1-201ENST00000219548 GZF1Q9H116 711 aaPredicted RBP28.93■■■□□ 2.22
STUB1-201ENST00000219548 DNAJC25Q9H1X3 360 aa28.93■■■□□ 2.22
STUB1-201ENST00000219548 FRMD4BQ9Y2L6 1034 aa28.93■■■□□ 2.22
STUB1-201ENST00000219548 CETN3O15182 167 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 THP07101 528 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 POU5F1Q01860 360 aaKnown RBP28.92■■■□□ 2.22
STUB1-201ENST00000219548 CYP24A1Q07973 514 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 NAB2Q15742 525 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 SPOUT1Q5T280 376 aaKnown RBP28.92■■■□□ 2.22
STUB1-201ENST00000219548 TMEM130Q8N3G9 435 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 KIF12Q96FN5 646 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 FUCA2Q9BTY2 467 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 NRDE2Q9H7Z3 1164 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 CACNG4Q9UBN1 327 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 DNAJB4Q9UDY4 337 aa28.92■■■□□ 2.22
STUB1-201ENST00000219548 SOX1O00570 391 aaPredicted RBP28.91■■■□□ 2.22
STUB1-201ENST00000219548 ZC3H11AO75152 810 aaKnown RBP eCLIP28.91■■■□□ 2.22
STUB1-201ENST00000219548 IL18RAPO95256 599 aa28.91■■■□□ 2.22
STUB1-201ENST00000219548 NFICP08651 508 aa28.91■■■□□ 2.22
STUB1-201ENST00000219548 LINC00271P0C7V0 271 aa28.91■■■□□ 2.22
STUB1-201ENST00000219548 CSGALNACT2Q8N6G5 542 aa28.91■■■□□ 2.22
STUB1-201ENST00000219548 C18orf25Q96B23 403 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms