RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 DNAJC24Q6P3W2 148 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 THEM5Q8N1Q8 247 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 ETNPPLQ8TBG4 499 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 SCFD1Q8WVM8 642 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 TXNRD2Q9NNW7 524 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 ACTN1P12814 892 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 MAGEA9P43362 315 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 SH3D19Q5HYK7 790 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 ERICH1Q86X53 443 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 TNFRSF25Q93038 417 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 TRIM4Q9C037 500 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 MTIF3Q9H2K0 278 aaKnown RBP10.04□□□□□ -0.8
CCDC113-201ENST00000219299 FAN1Q9Y2M0 1017 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
CCDC113-201ENST00000219299 HGSO14964 777 aaPredicted RBP10.04□□□□□ -0.8
CCDC113-201ENST00000219299 IFNB1P01574 187 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 STX2P32856 288 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 CASP4P49662 377 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 GUCY2FP51841 1108 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 MAIP1Q8WWC4 291 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 MARF1Q9Y4F3 1742 aaKnown RBP10.04□□□□□ -0.8
CCDC113-201ENST00000219299 OGTO15294 1046 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 GHRP10912 638 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 TBXAS1P24557 533 aaPredicted RBP10.04□□□□□ -0.8
CCDC113-201ENST00000219299 RBP5P82980 135 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 KRT81Q14533 505 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 SDCCAG8Q86SQ7 713 aaPredicted RBP10.04□□□□□ -0.8
CCDC113-201ENST00000219299 TMEM35BQ8NCS4 154 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 ZNF560Q96MR9 790 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
CCDC113-201ENST00000219299 PLEKHA4Q9H4M7 779 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 NUP188Q5SRE5 1749 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 CLTAP09496 248 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 SLC9A1P19634 815 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 TRIM68Q6AZZ1 485 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 DEFB128Q7Z7B8 93 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 ELOA2Q8IYF1 753 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 HVCN1Q96D96 273 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 ADAM22Q9P0K1 906 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 ASIC3Q9UHC3 531 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 ABCA3Q99758 1704 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 MYO1CO00159 1063 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 ENC1O14682 589 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 SLC16A3O15427 465 aaKnown RBP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 AP3M2P53677 418 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 TSPY1Q01534 308 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 BFSP2Q13515 415 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 IL17AQ16552 155 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 TMEM119Q4V9L6 283 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 TAF2Q6P1X5 1199 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 MMS22LQ6ZRQ5 1243 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 CPB2Q96IY4 423 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 ABHD10Q9NUJ1 306 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 RAB20Q9NX57 234 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 LIMA1Q9UHB6 759 aaKnown RBP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 FAM169AQ9Y6X4 670 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 SOWAHBA6NEL2 793 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 EXTL3O43909 919 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 TROVE2P10155 538 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 GRK4P32298 578 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 SSTR3P32745 418 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 UAP1Q16222 522 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 SLC35G1Q2M3R5 365 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 GBP7Q8N8V2 638 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 DEFB118Q96PH6 123 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 PANX2Q96RD6 677 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 HSD17B14Q9BPX1 270 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 PI4K2AQ9BTU6 479 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 SLITRK6Q9H5Y7 841 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 TXNDC9O14530 226 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 GPR182O15218 404 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 MSCO60682 206 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 TADA2AO75478 443 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 PNMA6AP0CW24 399 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-201ENST00000219299 CCDC105Q8IYK2 499 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 MKNK1Q9BUB5 465 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 BCAP29Q9UHQ4 241 aa10.03□□□□□ -0.8
CCDC113-201ENST00000219299 RAG1P15918 1043 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 ANXA13P27216 316 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 DUSP28Q4G0W2 176 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 NAA35Q5VZE5 725 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 FBXO38Q6PIJ6 1188 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 MAML3Q96JK9 1138 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 C11orf70Q9BRQ4 267 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 ACTR5Q9H9F9 607 aaPredicted RBP10.02□□□□□ -0.8
CCDC113-201ENST00000219299 NGRNQ9NPE2 291 aaKnown RBP10.02□□□□□ -0.8
CCDC113-201ENST00000219299 OLFML3Q9NRN5 406 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 CHD4Q14839 1912 aa10.02□□□□□ -0.8
CCDC113-201ENST00000219299 IRS2Q9Y4H2 1338 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 I3L4J1 428 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 HLA-DRAP01903 254 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 GNA15P30679 374 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 OR1G1P47890 313 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 MAP3K21Q5TCX8 1036 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 KAZNQ674X7 775 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 NSMCE1Q8WV22 266 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 DPF3Q92784 378 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 MTMR8Q96EF0 704 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms