RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 IL31RAQ8NI17 732 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 SAAL1Q96ER3 474 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 AGBL1Q96MI9 1066 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 SCLT1Q96NL6 688 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 CDC42EP4Q9H3Q1 356 aaKnown RBP18.49■□□□□ 0.55
USB1-201ENST00000219281 CCDC134Q9H6E4 229 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 LRRC19Q9H756 370 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 COL20A1Q9P218 1284 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 TNIP1Q15025 636 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 EXOC3L1Q86VI1 746 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 GEMIN8Q9NWZ8 242 aaKnown RBP18.49■□□□□ 0.55
USB1-201ENST00000219281 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.49■□□□□ 0.55
USB1-201ENST00000219281 USP20Q9Y2K6 914 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 MAPK13O15264 365 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 ACSL3O95573 720 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 PDE6CP51160 858 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 CDR2Q01850 454 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 KRT17Q04695 432 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 SGO2Q562F6 1265 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 OTUD6AQ7L8S5 288 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 MGARPQ8TDB4 240 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 PSPC1Q8WXF1 523 aaKnown RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 ROPN1BQ9BZX4 212 aaPredicted RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 ROPN1Q9HAT0 212 aaPredicted RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 UVRAGQ9P2Y5 699 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 PMM2O15305 246 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 CALCAP01258 141 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 YWHABP31946 246 aaKnown RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 QARSP47897 775 aaKnown RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 LRRC14Q15048 493 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 SNRNP35Q16560 246 aaKnown RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 DALRD3Q5D0E6 543 aaKnown RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 MFSD5Q6N075 450 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 TRMT10CQ7L0Y3 403 aaKnown RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 FAM160B2Q86V87 743 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 CEP57Q86XR8 500 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 CCDC50Q8IVM0 306 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 HELQQ8TDG4 1101 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 DHX38Q92620 1227 aaKnown RBP18.48■□□□□ 0.55
USB1-201ENST00000219281 AAASQ9NRG9 546 aa18.48■□□□□ 0.55
USB1-201ENST00000219281 NFKBIEO00221 500 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 TP73O15350 636 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 PLA2G6O60733 806 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 IBSPP21815 317 aaPredicted RBP18.47■□□□□ 0.55
USB1-201ENST00000219281 ADSSP30520 456 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 CHKAP35790 457 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 ELF3P78545 371 aaPredicted RBP18.47■□□□□ 0.55
USB1-201ENST00000219281 SPP2Q13103 211 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 PREPLQ4J6C6 727 aaPredicted RBP18.47■□□□□ 0.55
USB1-201ENST00000219281 FAM133BQ5BKY9 247 aaKnown RBP18.47■□□□□ 0.55
USB1-201ENST00000219281 KRT39Q6A163 491 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 ACAD10Q6JQN1 1059 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 TEPSINQ96N21 525 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 NSRP1Q9H0G5 558 aaKnown RBP18.47■□□□□ 0.55
USB1-201ENST00000219281 TOPORSQ9NS56 1045 aaPredicted RBP18.47■□□□□ 0.55
USB1-201ENST00000219281 ASIC3Q9UHC3 531 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 CCPG1Q9ULG6 757 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 SLC12A4Q9UP95 1085 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 FSCN2O14926 492 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 HSD17B4P51659 736 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 TKFCQ3LXA3 575 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 ZNF568Q3ZCX4 644 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 FAM102BQ5T8I3 360 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 TRPM8Q7Z2W7 1104 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 DYDC1Q8WWB3 177 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 AGO4Q9HCK5 861 aaKnown RBP18.47■□□□□ 0.55
USB1-201ENST00000219281 CHST7Q9NS84 486 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 DNAJC17Q9NVM6 304 aaKnown RBP18.47■□□□□ 0.55
USB1-201ENST00000219281 WHRNQ9P202 907 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 CD2APQ9Y5K6 639 aa18.47■□□□□ 0.55
USB1-201ENST00000219281 NFIBO00712 420 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 MGRN1O60291 552 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 ASNSP08243 561 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 CREB1P16220 341 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 NCKAP1LP55160 1127 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 TRIP13Q15645 432 aaPredicted RBP18.46■□□□□ 0.55
USB1-201ENST00000219281 UGCGQ16739 394 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 HIBCHQ6NVY1 386 aaPredicted RBP18.46■□□□□ 0.55
USB1-201ENST00000219281 TAS1R2Q8TE23 839 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 PARD3BQ8TEW8 1205 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 JDP2Q8WYK2 163 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 ATG4AQ8WYN0 398 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 DDX1Q92499 740 aaKnown RBP18.46■□□□□ 0.55
USB1-201ENST00000219281 ARHGEF2Q92974 986 aaKnown RBP18.46■□□□□ 0.55
USB1-201ENST00000219281 KIFC3Q9BVG8 833 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 ST6GALNAC4Q9H4F1 302 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 HOMER3Q9NSC5 361 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 FEM1BQ9UK73 627 aa18.46■□□□□ 0.55
USB1-201ENST00000219281 WLSQ5T9L3 541 aa18.46■□□□□ 0.54
USB1-201ENST00000219281 NT5C1BQ96P26 610 aa18.46■□□□□ 0.54
USB1-201ENST00000219281 ABCF3Q9NUQ8 709 aa18.46■□□□□ 0.54
USB1-201ENST00000219281 ANAPC7Q9UJX3 599 aa18.46■□□□□ 0.54
USB1-201ENST00000219281 FOXO6A8MYZ6 492 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 GRIN3BO60391 1043 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 GSTA1P08263 222 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 MAPK4P31152 587 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 GPC3P51654 580 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 SNRPFP62306 86 aaKnown RBP18.45■□□□□ 0.54
USB1-201ENST00000219281 PHLDB2Q86SQ0 1253 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 CCDC63Q8NA47 563 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms