RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PYDC1Q8WXC3 89 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 MAML1Q92585 1016 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 KRT35Q92764 455 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 CCSER1Q9C0I3 900 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 PCDH18Q9HCL0 1135 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 JAG2Q9Y219 1238 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 BCS1LQ9Y276 419 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 SPATA31A3Q5VYP0 1347 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 PHF2O75151 1096 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 LRRN2O75325 713 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 MTM1Q13496 603 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 GSTA3Q16772 222 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 C6orf183Q5T699 404 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 CLNKQ7Z7G1 428 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 GUF1Q8N442 669 aaKnown RBP15.57■□□□□ 0.08
PTPRA-201ENST00000216877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.57■□□□□ 0.08
PTPRA-201ENST00000216877 PLVAPQ9BX97 442 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 C12orf65Q9H3J6 166 aaKnown RBP15.57■□□□□ 0.08
PTPRA-201ENST00000216877 METTL14Q9HCE5 456 aaKnown RBP15.57■□□□□ 0.08
PTPRA-201ENST00000216877 ZNF212Q9UDV6 495 aa15.57■□□□□ 0.08
PTPRA-201ENST00000216877 POTEMA6NI47 508 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 ZWINTO95229 277 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 ANPEPP15144 967 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 NR2F2P24468 414 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 CHRNA3P32297 505 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 NAPAP54920 295 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 C16orf72Q14CZ0 275 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 C3orf67Q6ZVT6 689 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 GSTA5Q7RTV2 222 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 LZICQ8WZA0 190 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 PPP2R3CQ969Q6 453 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 TXLNGYQ9BZA5 131 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 TRABDQ9H4I3 376 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 ANAPC5Q9UJX4 755 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 HDAC9Q9UKV0 1011 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 WDR37Q9Y2I8 494 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 TCRBV7S2A1N4TA0A589 114 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 PDLIM1O00151 329 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 XPOTO43592 962 aaKnown RBP15.56■□□□□ 0.08
PTPRA-201ENST00000216877 TTLL1O95922 423 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 GOLGA8HP0CJ92 632 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 ARFIP2P53365 341 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 NAA20P61599 178 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 ASPHQ12797 758 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 NPY5RQ15761 445 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 C1orf228Q6PIY5 440 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 B3GNT6Q6ZMB0 384 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 TAB3Q8N5C8 712 aaPredicted RBP15.56■□□□□ 0.08
PTPRA-201ENST00000216877 SPATA5Q8NB90 893 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 STKLD1Q8NE28 680 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 RPGRQ92834 1020 aaKnown RBP15.56■□□□□ 0.08
PTPRA-201ENST00000216877 KLHL4Q9C0H6 718 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 LRRC27Q9C0I9 530 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 ROBO1Q9Y6N7 1651 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 CES2O00748 559 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 CLPTM1O96005 669 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 SERPINB8P50452 374 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 TRIP10Q15642 601 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 TMEM259Q4ZIN3 620 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 TSHZ1Q6ZSZ6 1077 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 PRELID2Q8N945 189 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 ATP11CQ8NB49 1132 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 C7orf25Q9BPX7 421 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 APPL1Q9UKG1 709 aa15.56■□□□□ 0.08
PTPRA-201ENST00000216877 MYH2Q9UKX2 1941 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CDH16O75309 829 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 KRT17Q04695 432 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 C10orf76Q5T2E6 689 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CC2D2BQ6DHV5 1058 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 ZNF746Q6NUN9 644 aaPredicted RBP15.55■□□□□ 0.08
PTPRA-201ENST00000216877 TTC27Q6P3X3 843 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CLEC4GQ6UXB4 293 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 RINLQ6ZS11 566 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 UNC13DQ70J99 1090 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 SAPCD2Q86UD0 394 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 ATG4AQ8WYN0 398 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 TNFRSF25Q93038 417 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 HSFX1Q9UBD0 423 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 GMEB1Q9Y692 573 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 SIGLEC16A6NMB1 481 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CD151P48509 253 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CASP7P55210 303 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CDC16Q13042 620 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 KRT79Q5XKE5 535 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 TMEM53Q6P2H8 277 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 LVRNQ6Q4G3 990 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 MTBPQ96DY7 904 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 PPARGC1AQ9UBK2 798 aaKnown RBP15.55■□□□□ 0.08
PTPRA-201ENST00000216877 PCDHA4Q9UN74 947 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 ALG6Q9Y672 507 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CIAO1O76071 339 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 LDHAP00338 332 aaKnown RBP15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CALM1P0DP23 149 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CALM2P0DP24 149 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 CALM3P0DP25 149 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 ALDH1B1P30837 517 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 RGS2P41220 211 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 DCAF12L1Q5VU92 463 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 LRRC55Q6ZSA7 311 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 TRMT10CQ7L0Y3 403 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms