RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 FZD8Q9H461 694 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 NMRK2Q9NPI5 230 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 PRMT7Q9NVM4 692 aaPredicted RBP18.74■□□□□ 0.59
VRK1-201ENST00000216639 CPA4Q9UI42 421 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 CNTNAP2Q9UHC6 1331 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 MYH10P35580 1976 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.73■□□□□ 0.59
VRK1-201ENST00000216639 CCDC151A5D8V7 595 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 H3BRB1 525 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 PHACTR2O75167 634 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 ERLIN1O75477 346 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 RHOXF2BP0C7M4 288 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 GZMAP12544 262 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 CYP11B1P15538 503 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 SMPD1P17405 629 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 IRF5Q13568 498 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 DGKDQ16760 1214 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 ZBTB41Q5SVQ8 909 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 ATF7IP2Q5U623 682 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 LMBRD2Q68DH5 695 aaPredicted RBP18.73■□□□□ 0.59
VRK1-201ENST00000216639 MPZL3Q6UWV2 235 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 RASAL3Q86YV0 1011 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 RHOT2Q8IXI1 618 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 NOA1Q8NC60 698 aaKnown RBP18.73■□□□□ 0.59
VRK1-201ENST00000216639 RHOXF2Q9BQY4 288 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 C16orf70Q9BSU1 422 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 PI4K2AQ9BTU6 479 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 ISCUQ9H1K1 167 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 TUT1Q9H6E5 874 aaKnown RBP18.73■□□□□ 0.59
VRK1-201ENST00000216639 NOCTQ9UK39 431 aaKnown RBP18.73■□□□□ 0.59
VRK1-201ENST00000216639 RAB21Q9UL25 225 aa18.73■□□□□ 0.59
VRK1-201ENST00000216639 CES2O00748 559 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 RTN2O75298 545 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 ZNF286BP0CG31 522 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 KRT5P13647 590 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 ABCB4P21439 1286 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 CXCR5P32302 372 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 BPIFB4P59827 614 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 CDR2Q01850 454 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 TAF1CQ15572 869 aaPredicted RBP18.72■□□□□ 0.59
VRK1-201ENST00000216639 NOP9Q86U38 636 aaKnown RBP18.72■□□□□ 0.59
VRK1-201ENST00000216639 SLC47A2Q86VL8 602 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 LRRC57Q8N9N7 239 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 NPLOC4Q8TAT6 608 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 DHX38Q92620 1227 aaKnown RBP18.72■□□□□ 0.59
VRK1-201ENST00000216639 PSMB7Q99436 277 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 IMPG2Q9BZV3 1241 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 ARFGAP3Q9NP61 516 aa18.72■□□□□ 0.59
VRK1-201ENST00000216639 PDE2AO00408 941 aaPredicted RBP18.71■□□□□ 0.59
VRK1-201ENST00000216639 MMP3P08254 477 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 PROZP22891 400 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 TBXAS1P24557 533 aaPredicted RBP18.71■□□□□ 0.59
VRK1-201ENST00000216639 MBTD1Q05BQ5 628 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 MAP2K5Q13163 448 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 ZNF568Q3ZCX4 644 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 PEX26Q7Z412 305 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 DAAM2Q86T65 1068 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 DNAAF5Q86Y56 855 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 SLC35G2Q8TBE7 412 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 TRPM7Q96QT4 1865 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 TARSL2A2RTX5 802 aaKnown RBP18.71■□□□□ 0.59
VRK1-201ENST00000216639 TTLL13PA6NNM8 815 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 FAM189A1O60320 539 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 FTLP02792 175 aaPredicted RBP18.71■□□□□ 0.59
VRK1-201ENST00000216639 HOXD8P13378 290 aaPredicted RBP18.71■□□□□ 0.59
VRK1-201ENST00000216639 WNT7BP56706 349 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 INHBEP58166 350 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 TNFAIP2Q03169 654 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 MORN1Q5T089 497 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 TAF3Q5VWG9 929 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 SLFN11Q7Z7L1 901 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 PBKQ96KB5 322 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 THAP2Q9H0W7 228 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 CPSF3Q9UKF6 684 aaKnown RBP18.71■□□□□ 0.59
VRK1-201ENST00000216639 AKT3Q9Y243 479 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 TNFSF13BQ9Y275 285 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 PTPRJQ12913 1337 aa18.71■□□□□ 0.59
VRK1-201ENST00000216639 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
VRK1-201ENST00000216639 ABLIM1O14639 778 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 ATP8B1O43520 1251 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 ZEB2O60315 1214 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 CLSTN1O94985 981 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 KIF4AO95239 1232 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 VNN1O95497 513 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 GJB1P08034 283 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 TNFSF9P41273 254 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 GPC5P78333 572 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 PPFIA1Q13136 1202 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 FAM187BQ17R55 369 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 SEZ6Q53EL9 994 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 RGMBQ6NW40 437 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 CC2D1AQ6P1N0 951 aaPredicted RBP18.7■□□□□ 0.58
VRK1-201ENST00000216639 MTHFD1LQ6UB35 978 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 ZNF677Q86XU0 584 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 PALB2Q86YC2 1186 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 IFNLR1Q8IU57 520 aaPredicted RBP18.7■□□□□ 0.58
VRK1-201ENST00000216639 MMGT1Q8N4V1 131 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 LINC01465Q8N7H1 131 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 SPATA4Q8NEY3 305 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms