RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FAXCQ5TGI0 409 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 IFNEQ86WN2 208 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 FAM81BQ96LP2 452 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 ITM2BQ9Y287 266 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 CPB1P15086 417 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 SLC10A5Q5PT55 438 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 LDHDQ86WU2 507 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 LRRC71Q8N4P6 559 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 CDC42BPGQ6DT37 1551 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 UBTFL6P0CB48 400 aaPredicted RBP14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 HIF1AQ16665 826 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 FSCBQ5H9T9 825 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 PROM2Q8N271 834 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 PGM1P36871 562 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 GALCP54803 685 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 THEMIS2Q5TEJ8 643 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 ELMO2Q96JJ3 720 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 PIN4Q9Y237 131 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 SURF1Q15526 300 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 ZC3H12BQ5HYM0 836 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 SPDYAQ5MJ70 313 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 BRINP3Q76B58 766 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 RHOT1Q8IXI2 618 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 NRBF2Q96F24 287 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 PRDM15P57071 1507 aaPredicted RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 SMARCA1P28370 1054 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 DPYDQ12882 1025 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 SGO1Q5FBB7 561 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 ACAP3Q96P50 834 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 MRPL4Q9BYD3 311 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 PARVAQ9NVD7 372 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 DUSP10Q9Y6W6 482 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 NRKQ7Z2Y5 1582 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 CARSP49589 748 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 TSPY1Q01534 308 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 NAALADL2Q58DX5 795 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 NOA1Q8NC60 698 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 NSUN6Q8TEA1 469 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 WNT8AQ9H1J5 351 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 NDE1Q9NXR1 346 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 STX18Q9P2W9 335 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 GTPBP10A4D1E9 387 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 KPNA7A9QM74 516 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 ICE2Q659A1 982 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 COG1Q8WTW3 980 aa14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 MORC2Q9Y6X9 1032 aaPredicted RBP14.37□□□□□ -0.11
TGFBR3-201ENST00000212355 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 HSPA9P38646 679 aaKnown RBP14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 B4GALNT2Q8NHY0 566 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 AGAP1Q9UPQ3 857 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 OVGP1Q12889 678 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 SNX12Q9UMY4 172 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 TRAF3IP3Q9Y228 551 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 RINLQ6ZS11 566 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 CYGBQ8WWM9 190 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 PBXIP1Q96AQ6 731 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 ASIC4Q96FT7 647 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 DIS3Q9Y2L1 958 aaKnown RBP14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 TARSL2A2RTX5 802 aaKnown RBP14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 MIF4GDA9UHW6 222 aaKnown RBP14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 AIM2O14862 343 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 RARBP10826 455 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 ZBTB17Q13105 803 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 ALCAMQ13740 583 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 EFHC2Q5JST6 749 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 SH3KBP1Q96B97 665 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 ERLEC1Q96DZ1 483 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 RAB6BQ9NRW1 208 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 AIPL1Q9NZN9 384 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 SNX9Q9Y5X1 595 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 KLRK1P26718 216 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 SPATA21Q7Z572 469 aa14.36□□□□□ -0.11
TGFBR3-201ENST00000212355 ZBTB39O15060 712 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 VCAM1P19320 739 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 CYP26B1Q9NR63 512 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 QRICH2Q9H0J4 1663 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 RPS6KA4O75676 772 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 MDH1P40925 334 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 RFFLQ8WZ73 363 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 UNKQ9C0B0 810 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 LRRC7Q96NW7 1537 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 MYO1GB0I1T2 1018 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 AARSP49588 968 aaKnown RBP eCLIP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 CASP4P49662 377 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 EN1Q05925 392 aaPredicted RBP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 TBCCQ15814 346 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 IGDCC4Q8TDY8 1250 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 NME5P56597 212 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 EXOSC10Q01780 885 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 MCPH1Q8NEM0 835 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 WDR48Q8TAF3 677 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 THTPAQ9BU02 230 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 CD248Q9HCU0 757 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 PIM2Q9P1W9 311 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms