RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 FAM47EQ6ZV65 393 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ZNF720Q7Z2F6 126 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 MSANTD4Q8NCY6 345 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 LBHD1Q9BQE6 289 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 MAD1L1Q9Y6D9 718 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ZNF536O15090 1300 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 H7C0C1 242 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 M0R2N6 131 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 FOXN3O00409 490 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 STAM2O75886 525 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 PRKCBP05771 671 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ARL1P40616 181 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ATP5OP48047 213 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ARPP19P56211 112 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 BASP1P80723 227 aaKnown RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 PPP2R5CQ13362 524 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 NEK9Q8TD19 979 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 KAT5Q92993 513 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 SEPT10Q9P0V9 454 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ASB14A6NK59 587 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ANKRD63C9JTQ0 380 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 PGK1P00558 417 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 SAT1P21673 171 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 GPC5P78333 572 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 FAM117BQ6P1L5 589 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 DNAJC24Q6P3W2 148 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 TAOK1Q7L7X3 1001 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 TRAPPC11Q7Z392 1133 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 PALM2Q8IXS6 379 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 HPCAL4Q9UM19 191 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 BRWD3Q6RI45 1802 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 INSRRP14616 1297 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 TFDP1Q14186 410 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 SETDB1Q15047 1291 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 WDR59Q6PJI9 974 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ZNF571Q7Z3V5 609 aaPredicted RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 FRMD5Q7Z6J6 570 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 RNF10Q8N5U6 811 aaKnown RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ARL8AQ96BM9 186 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 HSD17B14Q9BPX1 270 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 THAP2Q9H0W7 228 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ANAPC5Q9UJX4 755 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 NAGPAQ9UK23 515 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 VAV3Q9UKW4 847 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ATRNL1Q5VV63 1379 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 IGLV3-22A0A075B6J6 115 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 A0A087WZ62 844 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 FRMD3A2A2Y4 597 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 CXCL11O14625 94 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 SLC25A27O95847 323 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 PON1P27169 355 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 YWHAGP61981 247 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 IRX4P78413 519 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 KRT81Q14533 505 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ZRSR2Q15696 482 aaKnown RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ANO5Q75V66 913 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 MTMR14Q8NCE2 650 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 GPRASP2Q96D09 838 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ELAC2Q9BQ52 826 aaKnown RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 FDXACB1Q9BRP7 624 aaPredicted RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 NUB1Q9Y5A7 615 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 RASGRF2O14827 1237 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 DRP2Q13474 957 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 WDR72Q3MJ13 1102 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 BBS9Q3SYG4 887 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 LENG9Q96B70 501 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 ZIM3Q96PE6 472 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 NGRNQ9NPE2 291 aaKnown RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 L1RE1Q9UN81 338 aa12.87□□□□□ -0.35
CHPF2-201ENST00000035307 PIN4Q9Y237 131 aaKnown RBP12.87□□□□□ -0.35
CHPF2-201ENST00000035307 PFASO15067 1338 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 ITGA4P13612 1032 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
CHPF2-201ENST00000035307 ERFP50548 548 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 RWDD2BP57060 319 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 TMEM139Q8IV31 216 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 SLC20A1Q8WUM9 679 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 APEX2Q9UBZ4 518 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 TBX20Q9UMR3 447 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
CHPF2-201ENST00000035307 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 RNF8O76064 485 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 PLCB4Q15147 1175 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 RAET1EQ8TD07 263 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 RFFLQ8WZ73 363 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 HSPH1Q92598 858 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 OSMRQ99650 979 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms