RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SGK1O00141 431 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 MAN1A2O60476 641 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 STAM2O75886 525 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 ARL1P40616 181 aaPredicted RBP12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 VAMP7P51809 220 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 ROR2Q01974 943 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 PPP2R5CQ13362 524 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 MED21Q13503 144 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 TUBB6Q9BUF5 446 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 INTS2Q9H0H0 1204 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 ARHGAP20Q9P2F6 1191 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 PNMA2Q9UL42 364 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 CFAP69A5D8W1 941 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 EEF1B2P24534 225 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 RPS12P25398 132 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 YWHAEP62258 255 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 NAB2Q15742 525 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 RUBCNQ92622 972 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 THAP11Q96EK4 314 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 RMDN2Q96LZ7 410 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 TGS1Q96RS0 853 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 LXNQ9BS40 222 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 CCDC68Q9H2F9 335 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 GPBP1L1Q9HC44 474 aaPredicted RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 USP15Q9Y4E8 981 aaPredicted RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 COL1A1P02452 1464 aaPredicted RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 ZNF233A6NK53 670 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 SLC16A4O15374 487 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 TTI1O43156 1089 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 FSBPO95073 299 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 ASNSP08243 561 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 BRAFP15056 766 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 PMS2P54278 862 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 EPHB1P54762 984 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 RASA3Q14644 834 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 KIF22Q14807 665 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 MTERF2Q49AM1 385 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 BSPRYQ5W0U4 402 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 CCDC80Q76M96 950 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 DDX42Q86XP3 938 aaKnown RBP eCLIP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 PRMT1Q99873 361 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 HEMGNQ9BXL5 484 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 ARL2BPQ9Y2Y0 163 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 RAD51CO43502 376 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 CHN1P15882 459 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 CEP55Q53EZ4 464 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 RABGAP1LQ5R372 815 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 RGS9BPQ6ZS82 235 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 MDM1Q8TC05 714 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 CASP10Q92851 521 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 IL17RBQ9NRM6 502 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 EMSYQ7Z589 1322 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 GOLGA8SH3BPF8 625 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 LGR5O75473 907 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 MYBP10242 640 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 GFAPP14136 432 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 MTMR1Q13613 665 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 GFM2Q969S9 779 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 LRGUKQ96M69 825 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 PAGR1Q9BTK6 254 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
TSPAN9-201ENST00000011898 NDUFB10O96000 172 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 EZH1Q92800 747 aaPredicted RBP12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 RAB21Q9UL25 225 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 EXOC1LA0A1B0GW35 172 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 HAUS5O94927 633 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 TNNC2P02585 160 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 NQO1P15559 274 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 DCAF15Q66K64 600 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 CCDC137Q6PK04 289 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 MAML1Q92585 1016 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 NMD3Q96D46 503 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 FAM81BQ96LP2 452 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 NRBP2Q9NSY0 501 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 PPARGC1AQ9UBK2 798 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 LRRC37AA6NMS7 1700 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 MYH13Q9UKX3 1938 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 P4HBP07237 508 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 RPA1P27694 616 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 CHRNA3P32297 505 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 ABCB11O95342 1321 aa12.86□□□□□ -0.35
TSPAN9-201ENST00000011898 K7ERI5 159 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 GIPC1O14908 333 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 AHCYL1O43865 530 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 QARSP47897 775 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 AP2B1P63010 937 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 DYNLT1P63172 113 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 TMEM259Q4ZIN3 620 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms