RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TRPA1O75762 1119 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ODC1P11926 461 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ADORA2AP29274 412 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ARL4CP56559 192 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 DHX9Q08211 1270 aaKnown RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 STK4Q13043 487 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 RBBP8NLQ8NC74 664 aaPredicted RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 RNF25Q96BH1 459 aaPredicted RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ASIC4Q96FT7 647 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 AGO4Q9HCK5 861 aaKnown RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 H7C4K7 107 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 HLA-DRAP01903 254 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 KLRC1P26715 233 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 SULT1E1P49888 294 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 CACNB2Q08289 660 aaPredicted RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 DEFB115Q30KQ5 88 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 RFFLQ8WZ73 363 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 HMX1Q9NP08 348 aaPredicted RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 MED4Q9NPJ6 270 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 ANO9A1A5B4 782 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 H3BRB1 525 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 YY1P25490 414 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 ST8SIA6P61647 398 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 ZNF235Q14590 738 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 PGM5Q15124 567 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 VGLL2Q8N8G2 317 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 NIF3L1Q9GZT8 377 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 TUT1Q9H6E5 874 aaKnown RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 PRG3Q9Y2Y8 225 aaPredicted RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 ATN1P54259 1190 aaPredicted RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 DRP2Q13474 957 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 CUL1Q13616 776 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 ARHGAP15Q53QZ3 475 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 EFHBQ8N7U6 833 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 HPDLQ96IR7 371 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 FMO2Q99518 471 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 HINFPQ9BQA5 517 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 CAPN11Q9UMQ6 739 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 CLGNO14967 610 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 OGTO15294 1046 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 CYP2C8P10632 490 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 SLC1A1P43005 524 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 CLCN3P51790 818 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 NOP14P78316 857 aaKnown RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 EXOC1LA0A1B0GW35 172 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 CYP2C19P33261 490 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 GNL1P36915 607 aaPredicted RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 SPOPLQ6IQ16 392 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 C4orf19Q8IY42 314 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 WHAMMQ8TF30 809 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 IQANK1A0A1B0GTG1 560 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 PPP1R12AO14974 1030 aaPredicted RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 TEX33O43247 280 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 LRG1P02750 347 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 CDH6P55285 790 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 TPI1P60174 286 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 NOGQ13253 232 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 RBBP5Q15291 538 aaKnown RBP10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 TMED2Q15363 201 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 RGMBQ6NW40 437 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 CLEC17AQ6ZS10 378 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 SLITRK1Q96PX8 696 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 XPNPEP3Q9NQH7 507 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 SH3BP1Q9Y3L3 701 aa10.98□□□□□ -0.65
NIPAL3-201ENST00000003912 ALDH5A1P51649 535 aaPredicted RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 STX1BP61266 288 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 TAF1BQ53T94 588 aaPredicted RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 DHX40Q8IX18 779 aaKnown RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 MMTAG2Q9BU76 263 aaKnown RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 CAV1Q03135 178 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 AP1B1Q10567 949 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 MPZL3Q6UWV2 235 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 ARHGAP18Q8N392 663 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 DCLK2Q8N568 766 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 PCDHB8Q9UN66 801 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 ARHGAP25P42331 645 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 ROR1Q01973 937 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 CRY2Q49AN0 593 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 SRRM1Q8IYB3 904 aaKnown RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 FAM71BQ8TC56 605 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 ATP8B4Q8TF62 1192 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 YME1L1Q96TA2 773 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 VCXQ9H320 206 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 DPP3Q9NY33 737 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 FAM198AQ9UFP1 575 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 TTI1O43156 1089 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 ADGRB2O60241 1585 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 PSMD6Q15008 389 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 KIZQ2M2Z5 673 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 GLE1Q53GS7 698 aaKnown RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 NIPA1Q7RTP0 329 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 ELOA2Q8IYF1 753 aaPredicted RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 SCG3Q8WXD2 468 aaKnown RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 RAB3IPQ96QF0 476 aaPredicted RBP10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 IL17RBQ9NRM6 502 aa10.97□□□□□ -0.65
NIPAL3-201ENST00000003912 APOL1O14791 398 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms