RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Q922C1 641 aa16.65■□□□□ 0.26
Vcan-201ENSMUST00000109543 Cep19Q9CQA8 163 aa16.65■□□□□ 0.26
Vcan-201ENSMUST00000109543 2210011C24RikA0A087WQ89 206 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Mmrn2A6H6E2 943 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 CfhP06909 1234 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Mov10P23249 1004 aaKnown RBP16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ranbp1P34022 203 aaKnown RBP16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 UrosP51163 265 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Srebf2Q3U1N2 1130 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Dsg1aQ61495 1057 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Adcy2Q80TL1 1090 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Dennd1aQ8K382 1016 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Mrpl2Q9D773 306 aaKnown RBP16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Sbno2Q7TNB8 1349 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Prdm12A2AJ77 365 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Pitpnm1O35954 1243 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Drp2Q05AA6 957 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Trim72Q1XH17 477 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Retreg2Q6NS82 541 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Znf579Q80VM4 562 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Pdxdc1Q99K01 787 aaKnown RBP16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Aldh1b1Q9CZS1 519 aa16.64■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ttc13A0A1L1SSC7 844 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Timm44O35857 452 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ephb4P54761 987 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Grm2Q14BI2 872 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Thrap3Q569Z6 951 aaKnown RBP16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Cyfip2Q5SQX6 1253 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Adad1Q5SUE7 619 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Mcph1Q7TT79 822 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Mapk15Q80Y86 549 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ece2Q80Z60 881 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 6820408C15RikQ8BJX2 354 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Mageb18Q8BQR7 327 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Fsd1lQ8BYN5 507 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Myef2Q8C854 591 aaKnown RBP16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Vmn1r199Q8R280 367 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Aipl1Q924K1 328 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 MlxiplQ99MZ3 864 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Cpb2Q9JHH6 422 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 PhipQ8VDD9 1821 aaKnown RBP16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Polr2aP08775 1970 aaKnown RBP16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Znf804aA2AKY4 1200 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Tulp2P46686 562 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Tnni3P48787 211 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 IvlP48997 467 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ece1Q4PZA2 769 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Mkrn3Q60764 544 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Six1Q62231 284 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Gpr156Q6PCP7 798 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Erlin2Q8BFZ9 340 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 B3glctQ8BHT6 489 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 HhatQ8BMT9 499 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Eif3hQ91WK2 352 aaKnown RBP16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Themis2Q91YX0 663 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Grhl1Q921D9 618 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 Krt17Q9QWL7 433 aa16.63■□□□□ 0.25
Vcan-201ENSMUST00000109543 CaluO35887 315 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Aoc3O70423 765 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 EpoP07321 192 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ctnnd1P30999 938 aaKnown RBP16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 NsfP46460 744 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Rhox5P52651 210 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Vamp7P70280 220 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Gm3414Q3TNU4 584 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Dab2ipQ3UHC7 1189 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ccdc92bQ5SUE3 299 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Zbtb17Q60821 794 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Zic5Q7TQ40 622 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 3830417A13RikQ8BQJ2 303 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Usp33Q8R5K2 909 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Slc12a9Q99MR3 914 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Myo1cQ9WTI7 1063 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Znf394Q9Z1D9 521 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Bpifb9bA2AJD1 591 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Prdm15E9Q8T2 1174 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Gm3182K7N6T8 263 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Pdk4O70571 412 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Phka1P18826 1241 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Lta4hP24527 611 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Spink5Q148R4 1017 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Fam193bQ3U2K0 892 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Mtus1Q5HZI1 1210 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Tfap2bQ61313 459 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Tsga10Q6NY15 697 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ntrk3Q6VNS1 825 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Znf507Q6ZPY5 941 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Bpifb9aQ80XI7 591 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 E330017A01RikQ8BU47 192 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Olfr390Q8VEZ7 311 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Gtf2h1Q9DBA9 547 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 GgcxQ9QYC7 757 aa16.62■□□□□ 0.25
Vcan-201ENSMUST00000109543 Plekhg4A0A1L1SU27 1217 aa16.61■□□□□ 0.25
Vcan-201ENSMUST00000109543 Nub1P54729 614 aa16.61■□□□□ 0.25
Vcan-201ENSMUST00000109543 Trappc3lQ4KL14 181 aa16.61■□□□□ 0.25
Vcan-201ENSMUST00000109543 Ehbp1Q69ZW3 1231 aa16.61■□□□□ 0.25
Vcan-201ENSMUST00000109543 Fbxo38Q8BMI0 1194 aa16.61■□□□□ 0.25
Vcan-201ENSMUST00000109543 Prpf31Q8CCF0 499 aaKnown RBP16.61■□□□□ 0.25
Vcan-201ENSMUST00000109543 RnpepQ8VCT3 650 aaKnown RBP16.61■□□□□ 0.25
Vcan-201ENSMUST00000109543 Msantd4Q91YU3 345 aa16.61■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 69.3 ms