RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	SNN1	P48232	102 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	STR3	P53101	465 aa	Known RBP	4.57	□□□□□ -1.68
SEC39	YLR440C	SLM2	P53955	656 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	ERG13	P54839	491 aa	Known RBP	4.57	□□□□□ -1.68
SEC39	YLR440C	SED5	Q01590	340 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	MAK3	Q03503	176 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	ASR1	Q06834	288 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	ALG6	Q12001	544 aa	Known RBP	4.57	□□□□□ -1.68
SEC39	YLR440C	TFC7	Q12415	435 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	POM34	Q12445	299 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	SPE4	Q12455	300 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	COX5B	P00425	151 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	BCS1	P32839	456 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SEC39	YLR440C	AUR1	P36107	401 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC39	YLR440C	SAF1	P38352	637 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	YBR285W	P38354	144 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	DOG1	P38774	246 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	ARO9	P38840	513 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC39	YLR440C	BAT1	P38891	393 aa	Known RBP	4.57	□□□□□ -1.68
SEC39	YLR440C	SHU2	P38957	223 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	PHO90	P39535	881 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	KRE29	P40026	464 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	YIR016W	P40572	265 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	YFL040W	P43562	540 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	RPA43	P46669	326 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	YGL101W	P53144	215 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	CDH1	P53197	566 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	YPR109W	Q06104	294 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	THI21	Q08975	551 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	RDL1	Q12305	139 aa	Known RBP	4.57	□□□□□ -1.68
SEC39	YLR440C	VPS13	Q07878	3144 aa		4.57	□□□□□ -1.68
SEC39	YLR440C	GDH1	P07262	454 aa	Known RBP	4.56	□□□□□ -1.68
SEC39	YLR440C	YFL068W	P0CX99	160 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	YLL066W-A	P0CY00	160 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	YLL067W-A	P0CY01	160 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	GLN3	P18494	730 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	CDC20	P26309	610 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	GAC1	P28006	793 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	YHR035W	P38769	630 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	YAL037W	P39728	267 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	MNN10	P50108	393 aa	Known RBP	4.56	□□□□□ -1.68
SEC39	YLR440C	SKP1	P52286	194 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	COX18	P53239	316 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	FMN1	Q03778	218 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	RAV2	Q03956	351 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	RNH202	Q05635	350 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	NUS1	Q12063	375 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	YDL177C	Q12257	170 aa		4.56	□□□□□ -1.68
SEC39	YLR440C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.56	□□□□□ -1.68
SEC39	YLR440C	CDC4	P07834	779 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	RPL18A	P0CX49	186 aa	Known RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	RPL18B	P0CX50	186 aa	Known RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	FCY2	P17064	533 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	STP22	P25604	385 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	CEM1	P39525	442 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	AZF1	P41696	914 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	GWT1	P47026	490 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	YDL186W	P48568	277 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	EXG2	P52911	562 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	MMS2	P53152	137 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	MRH4	P53166	561 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	FRE4	P53746	719 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	OSH6	Q02201	448 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	YMR206W	Q03695	313 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TSA2	Q04120	196 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	HPT1	Q04178	221 aa	Known RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	TRI1	Q05024	226 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	AFT2	Q08957	416 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	FRE8	Q12209	686 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	AIM45	Q12480	344 aa	Known RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	YLR462W	O13556	202 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	CYC7	P00045	113 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	CAR1	P00812	333 aa	Known RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	ALG7	P07286	448 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-LR1	P0C2J4	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	YEL076C-A	P0CX16	216 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	YLR464W	P0CX17	216 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-F	P0CX61	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-GR2	P0CX62	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	CDC26	P14724	124 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	LSB5	P25369	354 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-C	P25383	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	DCG1	P32460	244 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	THI80	P35202	319 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	IRS4	P36115	615 aa	Known RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	YEL076C	P39971	216 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	YER189W	P40104	122 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	HAC1	P41546	238 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	UBC9	P50623	157 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-DR2	Q03483	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	YMR310C	Q04867	317 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-B	Q12260	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-OR2	Q12293	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-DR1	Q12392	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-OR1	Q12439	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	AHA1	Q12449	350 aa	Known RBP	4.55	□□□□□ -1.68
SEC39	YLR440C	RAX2	Q12465	1220 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	TY2A-DR3	Q99303	438 aa		4.55	□□□□□ -1.68
SEC39	YLR440C	YBR085C-A	O43137	85 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms