RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 SEZ6Q53EL9 994 aa18.98■□□□□ 0.63
PHGDH-227ENST00000641811 RESP18Q5W5W9 173 aa18.98■□□□□ 0.63
PHGDH-227ENST00000641811 APBB1IPQ7Z5R6 666 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-227ENST00000641811 BICD1Q96G01 975 aa18.98■□□□□ 0.63
PHGDH-227ENST00000641811 SPATA32Q96LK8 384 aa18.98■□□□□ 0.63
PHGDH-227ENST00000641811 TMEM175Q9BSA9 504 aa18.98■□□□□ 0.63
PHGDH-227ENST00000641811 CLDND1Q9NY35 253 aa18.98■□□□□ 0.63
PHGDH-227ENST00000641811 TBC1D7Q9P0N9 293 aa18.98■□□□□ 0.63
PHGDH-227ENST00000641811 XIRP2A4UGR9 3374 aa18.98■□□□□ 0.63
PHGDH-227ENST00000641811 BRWD1Q9NSI6 2320 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 ZMYM2Q9UBW7 1377 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 POLR2DO15514 142 aaKnown RBP18.97■□□□□ 0.63
PHGDH-227ENST00000641811 TOM1L1O75674 476 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 MCF2P10911 925 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 IDEP14735 1019 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 GRM5P41594 1212 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 GRIK3Q13003 919 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 COL19A1Q14993 1142 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 ZPBP2Q6X784 338 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 DDX53Q86TM3 631 aaKnown RBP18.97■□□□□ 0.63
PHGDH-227ENST00000641811 VPS52Q8N1B4 723 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 AUTS2Q8WXX7 1259 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 PABPC5Q96DU9 382 aaKnown RBP18.97■□□□□ 0.63
PHGDH-227ENST00000641811 HAPLN2Q9GZV7 340 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 TLE6Q9H808 572 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 MARCH5Q9NX47 278 aa18.97■□□□□ 0.63
PHGDH-227ENST00000641811 TDRD15B5MCY1 1934 aaKnown RBP18.96■□□□□ 0.63
PHGDH-227ENST00000641811 H3BQ06 376 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-227ENST00000641811 LTBRP36941 435 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 RBM10P98175 930 aaKnown RBP18.96■□□□□ 0.63
PHGDH-227ENST00000641811 GTF2BQ00403 316 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 DLX2Q07687 328 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-227ENST00000641811 CTC1Q2NKJ3 1217 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 TPRNQ4KMQ1 711 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 GLRA4Q5JXX5 417 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 PDE12Q6L8Q7 609 aaKnown RBP18.96■□□□□ 0.63
PHGDH-227ENST00000641811 IQUBQ8NA54 791 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 KCNN1Q92952 543 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 PPP2R3CQ969Q6 453 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 PAAF1Q9BRP4 392 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 CCDC94Q9BW85 323 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-227ENST00000641811 IKZF4Q9H2S9 585 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 KBTBD4Q9NVX7 518 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 FAM13BQ9NYF5 915 aa18.96■□□□□ 0.63
PHGDH-227ENST00000641811 CARNS1A5YM72 827 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 CLDN3O15551 220 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 MEFVO15553 781 aaPredicted RBP18.95■□□□□ 0.62
PHGDH-227ENST00000641811 CXCL14O95715 111 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 THP07101 528 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 CA8P35219 290 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 MATR3P43243 847 aaKnown RBP eCLIP18.95■□□□□ 0.62
PHGDH-227ENST00000641811 LIG4P49917 911 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 MCL1Q07820 350 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 ADAM15Q13444 863 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 NOLC1Q14978 699 aaKnown RBP eCLIP18.95■□□□□ 0.62
PHGDH-227ENST00000641811 NAB2Q15742 525 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 HERC4Q5GLZ8 1057 aaPredicted RBP18.95■□□□□ 0.62
PHGDH-227ENST00000641811 TJAP1Q5JTD0 557 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 SLC39A4Q6P5W5 647 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 TAS1R1Q7RTX1 841 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 ZNF720Q7Z2F6 126 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 FGFBP2Q9BYJ0 223 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 ZBP1Q9H171 429 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 TNMDQ9H2S6 317 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 CUEDC2Q9H467 287 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 NGRNQ9NPE2 291 aaKnown RBP18.95■□□□□ 0.62
PHGDH-227ENST00000641811 PANK4Q9NVE7 773 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 ATP6V1DQ9Y5K8 247 aa18.95■□□□□ 0.62
PHGDH-227ENST00000641811 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-227ENST00000641811 C2orf71A6NGG8 1288 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 CASTOR2A6NHX0 329 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 TISP43B9A030 160 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 ANKRD63C9JTQ0 380 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 HNRNPDLO14979 420 aaKnown RBP18.94■□□□□ 0.62
PHGDH-227ENST00000641811 PIGRP01833 764 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 BMP1P13497 986 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 GAP43P17677 238 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 CASP1P29466 404 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 YARSP54577 528 aaKnown RBP18.94■□□□□ 0.62
PHGDH-227ENST00000641811 TUSC3Q13454 348 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 SMC1AQ14683 1233 aaKnown RBP18.94■□□□□ 0.62
PHGDH-227ENST00000641811 DUSP6Q16828 381 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 AAK1Q2M2I8 961 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 MAP4K3Q8IVH8 894 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 EFHBQ8N7U6 833 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 MRPL43Q8N983 215 aaKnown RBP18.94■□□□□ 0.62
PHGDH-227ENST00000641811 ACAP3Q96P50 834 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 ST6GALNAC4Q9H4F1 302 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 MRPL44Q9H9J2 332 aaKnown RBP18.94■□□□□ 0.62
PHGDH-227ENST00000641811 GDPD2Q9HCC8 539 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 SEL1LQ9UBV2 794 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 KCNH3Q9ULD8 1083 aa18.94■□□□□ 0.62
PHGDH-227ENST00000641811 SPTBN5Q9NRC6 3674 aaKnown RBP18.94■□□□□ 0.62
PHGDH-227ENST00000641811 SMIM28A0A1B0GU29 152 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 A0A1B0GVL5 298 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 FRMD3A2A2Y4 597 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 NCK2O43639 380 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 TBX10O75333 385 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 NR1I2O75469 434 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 GLP2RO95838 553 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms