RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 JDP2Q8WYK2 163 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 KIFAP3Q92845 792 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 FBXO6Q9NRD1 293 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-227ENST00000640957 WDR35Q9P2L0 1181 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 GGA1Q9UJY5 639 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 SERPINA10Q9UK55 444 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 STK10O94804 968 aaKnown RBP14.68□□□□□ -0.06
SCARB2-227ENST00000640957 SOX5P35711 763 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 PIK3CAP42336 1068 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 PPATQ06203 517 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 SGO2Q562F6 1265 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 SYCP2LQ5T4T6 812 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 GALNT15Q8N3T1 639 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 WDR60Q8WVS4 1066 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 SLC5A5Q92911 643 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 UBE2TQ9NPD8 197 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-227ENST00000640957 LRRC42Q9Y546 428 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 RPS6KA4O75676 772 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 FGFR1P11362 822 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 SLMAPQ14BN4 828 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 SGSM1Q2NKQ1 1148 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 CYP2W1Q8TAV3 490 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 NAP1L3Q99457 506 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-227ENST00000640957 TTC1Q99614 292 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 MIPEPQ99797 713 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 GORASP1Q9BQQ3 440 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 HERPUD2Q9BSE4 406 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 STMN4Q9H169 189 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-227ENST00000640957 CARD9Q9H257 536 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 TXLNGQ9NUQ3 528 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 PRKAG3Q9UGI9 489 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 SCOCQ9UIL1 159 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 BZW2Q9Y6E2 419 aaKnown RBP14.68□□□□□ -0.06
SCARB2-227ENST00000640957 CES2O00748 559 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 USP1O94782 785 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 ECEL1O95672 775 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 CA4P22748 312 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 RPA3P35244 121 aaPredicted RBP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 DAGLBQ8NCG7 672 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 ASAP3Q8TDY4 903 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 GBP5Q96PP8 586 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 TAOK3Q9H2K8 898 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 DNAJC18Q9H819 358 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 A0A1W2PPM1 405 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 FAM187AA6NFU0 413 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 O00370 1275 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 GNA14O95837 355 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 MRPS35P82673 323 aaKnown RBP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 MTFR1Q15390 333 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 TMEM119Q4V9L6 283 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 FAM186BQ8IYM0 893 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 UBL4BQ8N7F7 174 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 CLPTM1LQ96KA5 538 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 MOV10L1Q9BXT6 1211 aaKnown RBP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 CD209Q9NNX6 404 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 DLG4P78352 724 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 DEUP1Q05D60 604 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 DHX34Q14147 1143 aaKnown RBP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 FASTKD3Q14CZ7 662 aaKnown RBP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 PKN2Q16513 984 aaKnown RBP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 C10orf76Q5T2E6 689 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 ARHGAP22Q7Z5H3 698 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 CATSPER3Q86XQ3 398 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 MYCT1Q8N699 235 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 DHX36Q9H2U1 1008 aaKnown RBP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 ZFP69BQ9UJL9 534 aa14.67□□□□□ -0.06
SCARB2-227ENST00000640957 R3HDM2Q9Y2K5 976 aaKnown RBP14.67□□□□□ -0.06
SCARB2-227ENST00000640957 COL4A1P02462 1669 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 ABCB11O95342 1321 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 CICQ96RK0 1608 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 USP17L10C9JJH3 530 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 PPP1R11O60927 126 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 TBX10O75333 385 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 ZSCAN5DPP0CG00 497 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 PCP11498 1178 aaKnown RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 CHRNA3P32297 505 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 PSMC4P43686 418 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 POLGP54098 1239 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 UBXN2AP68543 259 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 PPP2R5CQ13362 524 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 CUL3Q13618 768 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 ACSBG2Q5FVE4 666 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 PHLDB3Q6NSJ2 640 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 TTC7BQ86TV6 843 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 MFN1Q8IWA4 741 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 KBTBD2Q8IY47 623 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 HIPK4Q8NE63 616 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 ZSWIM2Q8NEG5 633 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 HAUS1Q96CS2 278 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 TMX4Q9H1E5 349 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 DBNDD1Q9H9R9 158 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 SCAF8Q9UPN6 1271 aaKnown RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 GSTT1P30711 240 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 ZBTB16Q05516 673 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 SLC1A5Q15758 541 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 LRRC23Q53EV4 343 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 PLEKHG4Q58EX7 1191 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 ZC3H12AQ5D1E8 599 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms