RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 XIRP2A4UGR9 3374 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 ATF7P17544 494 aaPredicted RBP13.75□□□□□ -0.21
PAX6-272ENST00000640460 EHHADHQ08426 723 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 COASYQ13057 564 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 CCDC65Q8IXS2 484 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 MRPL38Q96DV4 380 aaKnown RBP13.75□□□□□ -0.21
PAX6-272ENST00000640460 EIF2AQ9BY44 585 aaKnown RBP13.75□□□□□ -0.21
PAX6-272ENST00000640460 FGFBP2Q9BYJ0 223 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 PDZD7Q9H5P4 517 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 OLFML3Q9NRN5 406 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 FAM105AQ9NUU6 356 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 THEGQ9P2T0 379 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 SEL1LQ9UBV2 794 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 RWDD3Q9Y3V2 267 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 NFE2L3Q9Y4A8 694 aa13.75□□□□□ -0.21
PAX6-272ENST00000640460 PVALEFA0A1B0GWK0 134 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 TBKBP1A7MCY6 615 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 H0YCG3 227 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 RB1P06400 928 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 CASP5P51878 434 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 GTF2BQ00403 316 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 SKIV2LQ15477 1246 aaKnown RBP13.74□□□□□ -0.21
PAX6-272ENST00000640460 ZC2HC1CQ53FD0 456 aaPredicted RBP13.74□□□□□ -0.21
PAX6-272ENST00000640460 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 UNC13DQ70J99 1090 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 ZNF720Q7Z2F6 126 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 ZNF598Q86UK7 904 aaKnown RBP13.74□□□□□ -0.21
PAX6-272ENST00000640460 SPC24Q8NBT2 197 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 KIAA0895Q8NCT3 520 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 CCDC51Q96ER9 411 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 ST6GALNAC4Q9H4F1 302 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 MRPL44Q9H9J2 332 aaKnown RBP13.74□□□□□ -0.21
PAX6-272ENST00000640460 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
PAX6-272ENST00000640460 TBX20Q9UMR3 447 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 PCDHB2Q9Y5E7 798 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 A0A0C4DFX4 3053 aa13.74□□□□□ -0.21
PAX6-272ENST00000640460 TCF20Q9UGU0 1960 aaKnown RBP13.74□□□□□ -0.21
PAX6-272ENST00000640460 MEIS3P2A8K0S8 358 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 GRM6O15303 877 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 ZNF623O75123 536 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 PPP1R37O75864 691 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 PMS1P54277 932 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 FANCCQ00597 558 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 STRN3Q13033 797 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 ATF7IP2Q5U623 682 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 SPATA1Q5VX52 437 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 EEF1DP3Q658K8 133 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 SLC27A1Q6PCB7 646 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 SMG8Q8ND04 991 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 GLIS3Q8NEA6 775 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 LPPQ93052 612 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 MRFAP1L1Q96HT8 127 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 NAP1L5Q96NT1 182 aaPredicted RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 CASD1Q96PB1 797 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 ACO2Q99798 780 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 C11orf84Q9BUA3 381 aaPredicted RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 TARS2Q9BW92 718 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 STRA6Q9BX79 667 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 RWDD2AQ9UIY3 292 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 CTNND2Q9UQB3 1225 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 N4BP3O15049 544 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 NPTXRO95502 500 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 EOMESO95936 686 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 MYBP10242 640 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 SCP2P22307 547 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 RAB27AP51159 221 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 TFF2Q03403 129 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 TMEM132AQ24JP5 1023 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 HS1BP3Q53T59 392 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 CLLU1OSQ5K130 101 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 ATXN2LQ8WWM7 1075 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 NELFBQ8WX92 580 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 P2RX5Q93086 422 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 PLVAPQ9BX97 442 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 COL25A1Q9BXS0 654 aaPredicted RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 XPO4Q9C0E2 1151 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 CWH43Q9H720 699 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 TYW1Q9NV66 732 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
PAX6-272ENST00000640460 IFNKQ9P0W0 207 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 HES2Q9Y543 173 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 IPPQ9Y573 584 aa13.73□□□□□ -0.21
PAX6-272ENST00000640460 VCANP13611 3396 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 MYO7AQ13402 2215 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 TRIM49BA6NDI0 452 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 ABLIM1O14639 778 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 GCNT3O95395 438 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 ITGB1P05556 798 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 SKIP12755 728 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 PROZP22891 400 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 CDC25BP30305 580 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 KCNA1Q09470 495 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 CAMK1Q14012 370 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 PTPROQ16827 1216 aa13.72□□□□□ -0.21
PAX6-272ENST00000640460 LRRC55Q6ZSA7 311 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms