RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	SHCBP1L	Q9BZQ2	653 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	ZNF287	Q9HBT7	754 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	CTNNAL1	Q9UBT7	734 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	WDR19	Q8NEZ3	1342 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895		H7C1W4	665 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	MAN1A2	O60476	641 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	NAA20	P61599	178 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	OCA2	Q04671	838 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	CCDC15	Q0P6D6	951 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	MTFR1	Q15390	333 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	SLC35G2	Q8TBE7	412 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	IGDCC4	Q8TDY8	1250 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	PTPRN2	Q92932	1015 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	INPP4A	Q96PE3	977 aa	Predicted RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	PRPF18	Q99633	342 aa	Known RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	SLCO1B3	Q9NPD5	702 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	MRGBP	Q9NV56	204 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	ZNF229	Q9UJW7	825 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	CCPG1	Q9ULG6	757 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	SMG5	Q9UPR3	1016 aa	Known RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	DLG5	Q8TDM6	1919 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	SMAP	O00193	183 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	RIPK2	O43353	540 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	PAEP	P09466	180 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	PUM3	Q15397	648 aa	Known RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	SFR1	Q86XK3	245 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	GINM1	Q9NU53	330 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	WARS2	Q9UGM6	360 aa	Known RBP	12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	LRRC42	Q9Y546	428 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	IVNS1ABP	Q9Y6Y0	642 aa		12.03	□□□□□ -0.48
SPIN3-231	ENST00000639895	USP17L12	C9JPN9	530 aa		12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	USP17L21	D6R901	530 aa		12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	SKIV2L2	P42285	1042 aa	Known RBP	12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	AUH	Q13825	339 aa	Known RBP	12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	UNC13D	Q70J99	1090 aa		12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	SPATA5	Q8NB90	893 aa		12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	PYROXD1	Q8WU10	500 aa		12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	EMILIN3	Q9NT22	766 aa		12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	DDX28	Q9NUL7	540 aa	Known RBP	12.02	□□□□□ -0.48
SPIN3-231	ENST00000639895	CYP27B1	O15528	508 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	PEX11A	O75192	247 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	SEC24D	O94855	1032 aa	Predicted RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	OASL	Q15646	514 aa	Known RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	C6orf183	Q5T699	404 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	LPCAT2	Q7L5N7	544 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	EXOC3L1	Q86VI1	746 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	ECHDC2	Q86YB7	292 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	STKLD1	Q8NE28	680 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	DGCR14	Q96DF8	476 aa	Known RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	SNF8	Q96H20	258 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	TSNARE1	Q96NA8	513 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	MAF1	Q9H063	256 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	LRMDA	Q9H2I8	198 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	PARVB	Q9HBI1	364 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	TACC3	Q9Y6A5	838 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	PCCA	P05165	728 aa	Predicted RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	PHKA1	P46020	1223 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	MRPS15	P82914	257 aa	Known RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	RNF43	Q68DV7	783 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	ZNF662	Q6ZS27	426 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	RHOT2	Q8IXI1	618 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	GUF1	Q8N442	669 aa	Known RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	EIF1AD	Q8N9N8	165 aa	Known RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	RBM46	Q8TBY0	533 aa	Known RBP	12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	KLHL4	Q9C0H6	718 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	NACA2	Q9H009	215 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	ARMCX1	Q9P291	453 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	NAGPA	Q9UK23	515 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	PCDHA4	Q9UN74	947 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	UTY	O14607	1347 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895	HEG1	Q9ULI3	1381 aa		12.02	□□□□□ -0.49
SPIN3-231	ENST00000639895		G3V3G9	751 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	PDE8A	O60658	829 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	GOLGA8H	P0CJ92	632 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	BFSP1	Q12934	665 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	DCAF8	Q5TAQ9	597 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	POTEE	Q6S8J3	1075 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	ERLEC1	Q96DZ1	483 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	GCNA	Q96QF7	691 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	EPS15L1	Q9UBC2	864 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	SGK1	O00141	431 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	EPHB6	O15197	1021 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	ADCY6	O43306	1168 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	ESRRB	O95718	433 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	CIITA	P33076	1130 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	CDK7	P50613	346 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	RABL6	Q3YEC7	729 aa	Predicted RBP	12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	IZUMO3	Q5VZ72	239 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	PPM1K	Q8N3J5	372 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	ZNF333	Q96JL9	665 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	RBM15	Q96T37	977 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	APOBEC2	Q9Y235	224 aa	Known RBP	12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	MON2	Q7Z3U7	1717 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	LOC100653049	A0A140TA62	436 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	LPXN	O60711	386 aa		12.01	□□□□□ -0.49
SPIN3-231	ENST00000639895	KRT34	O76011	436 aa		12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms