RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 LURAP1Q96LR2 239 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 C16orf70Q9BSU1 422 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 OSBPL7Q9BZF2 842 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 NYAP2Q9P242 653 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 KIAA1549LQ6ZVL6 1849 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 CCDC171Q6TFL3 1326 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 ARNTLO00327 626 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 MPHOSPH10O00566 681 aaKnown RBP4.09□□□□□ -1.75
CCDC7-213ENST00000639290 CHADO15335 359 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 C4BPAP04003 597 aaKnown RBP4.09□□□□□ -1.75
CCDC7-213ENST00000639290 PSMC3P17980 439 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 GBP1P32455 592 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 GATMP50440 423 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 CHMP4BP1P59074 171 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 MORC3Q14149 939 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 SWT1Q5T5J6 900 aaKnown RBP4.09□□□□□ -1.75
CCDC7-213ENST00000639290 CAPRIN2Q6IMN6 1127 aaKnown RBP4.09□□□□□ -1.75
CCDC7-213ENST00000639290 NPAS3Q8IXF0 933 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 ABI1Q8IZP0 508 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 CHURC1Q8WUH1 139 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 COPS5Q92905 334 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 ZNF215Q9UL58 517 aaPredicted RBP4.09□□□□□ -1.75
CCDC7-213ENST00000639290 NFE2L3Q9Y4A8 694 aa4.09□□□□□ -1.75
CCDC7-213ENST00000639290 FN1P02751 2386 aaKnown RBP4.09□□□□□ -1.76
CCDC7-213ENST00000639290 VWA8A3KMH1 1905 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 UBE4BO95155 1302 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 ANO9A1A5B4 782 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 MBLAC1A4D2B0 266 aaPredicted RBP4.09□□□□□ -1.76
CCDC7-213ENST00000639290 ZNF263O14978 683 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 EXTL3O43909 919 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 CCNE1P24864 410 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 ITGA3P26006 1051 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 CD52P31358 61 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 EPHA5P54756 1037 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 BCAR1P56945 870 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 CALD1Q05682 793 aaKnown RBP4.09□□□□□ -1.76
CCDC7-213ENST00000639290 KIZQ2M2Z5 673 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 CCDC81Q6ZN84 652 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 Q6ZS52 159 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 LRRC55Q6ZSA7 311 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 GMCL1P1Q8NEA9 526 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 SREK1Q8WXA9 508 aaKnown RBP4.09□□□□□ -1.76
CCDC7-213ENST00000639290 SPATA32Q96LK8 384 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 RPS6KC1Q96S38 1066 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 TMEM175Q9BSA9 504 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 GTPBP2Q9BX10 602 aaKnown RBP4.09□□□□□ -1.76
CCDC7-213ENST00000639290 CRNKL1Q9BZJ0 848 aaKnown RBP4.09□□□□□ -1.76
CCDC7-213ENST00000639290 ZFP14Q9HCL3 533 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 NPDC1Q9NQX5 325 aaPredicted RBP4.09□□□□□ -1.76
CCDC7-213ENST00000639290 RAI14Q9P0K7 980 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 PADI3Q9ULW8 664 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 CDY2AQ9Y6F7 541 aa4.09□□□□□ -1.76
CCDC7-213ENST00000639290 V9GY48 417 aaPredicted RBP4.09□□□□□ -1.76
CCDC7-213ENST00000639290 H3BRB1 525 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 DIAPH2O60879 1101 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 ATG7O95352 703 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 ARIH2O95376 493 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 URODP06132 367 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 ATXN1LP0C7T5 689 aaKnown RBP4.08□□□□□ -1.76
CCDC7-213ENST00000639290 JUPP14923 745 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 TCF3P15923 654 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 SLC6A4P31645 630 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 CA8P35219 290 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 RIPK4P57078 832 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 UVSSAQ2YD98 709 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 C12orf40Q86WS4 652 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 PPP1R13LQ8WUF5 828 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 TNPO1Q92973 898 aaKnown RBP4.08□□□□□ -1.76
CCDC7-213ENST00000639290 CAMK1GQ96NX5 476 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 MMS19Q96T76 1030 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 AMNQ9BXJ7 453 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 RNPEPQ9H4A4 650 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 TUT1Q9H6E5 874 aaKnown RBP4.08□□□□□ -1.76
CCDC7-213ENST00000639290 SMC4Q9NTJ3 1288 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 AATFQ9NY61 560 aaKnown RBP eCLIP4.08□□□□□ -1.76
CCDC7-213ENST00000639290 SAP30BPQ9UHR5 308 aaKnown RBP4.08□□□□□ -1.76
CCDC7-213ENST00000639290 ICE1Q9Y2F5 2266 aa4.08□□□□□ -1.76
CCDC7-213ENST00000639290 SERINC4A6NH21 518 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 C3orf80F5H4A9 247 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 SPECC1L-ADORA2AF8WAN1 911 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 CFIP05156 583 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 EEF2P13639 858 aaKnown RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 FCARP24071 287 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 RARSP54136 660 aaKnown RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 AMPD2Q01433 879 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 LILRA6Q6PI73 481 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 CCER1Q8TC90 406 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 GRAMD1AQ96CP6 724 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 SLITRK1Q96PX8 696 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 TMEM245Q9H330 911 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 TMX1Q9H3N1 280 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 AGO3Q9H9G7 860 aaKnown RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.07□□□□□ -1.76
CCDC7-213ENST00000639290 RNF19AQ9NV58 838 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 OBP2AQ9NY56 170 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 TJP2Q9UDY2 1190 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 SVILO95425 2214 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 THADAQ6YHU6 1953 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 LAMA5O15230 3695 aa4.07□□□□□ -1.76
CCDC7-213ENST00000639290 GPR182O15218 404 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms