RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PTGESO14684 152 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 TGM5O43548 720 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 TADA2AO75478 443 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 PRKCBP05771 671 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 RPL17P18621 184 aaKnown RBP18.62■□□□□ 0.57
SMN2-216ENST00000638794 LIG1P18858 919 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
SMN2-216ENST00000638794 NUBP1P53384 320 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 HMGN5P82970 282 aaKnown RBP18.62■□□□□ 0.57
SMN2-216ENST00000638794 TUSC3Q13454 348 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 TDGQ13569 410 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 NBR1Q14596 966 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 ECM1Q16610 540 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 MAPK6Q16659 721 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 TMEM132AQ24JP5 1023 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 HAUS3Q68CZ6 603 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 NOSTRINQ8IVI9 506 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 GPR65Q8IYL9 337 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 ZNF707Q96C28 371 aaPredicted RBP18.62■□□□□ 0.57
SMN2-216ENST00000638794 KIFC3Q9BVG8 833 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 CXCL16Q9H2A7 254 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 MFSD1Q9H3U5 465 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 FNIP2Q9P278 1114 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 CLUHO75153 1309 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 TRIP11Q15643 1979 aa18.62■□□□□ 0.57
SMN2-216ENST00000638794 CFAP54Q96N23 3096 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 VWA8A3KMH1 1905 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 SF3B1O75533 1304 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMN2-216ENST00000638794 H0Y858 1186 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 ACKR2O00590 384 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 GALR2O43603 387 aaPredicted RBP18.61■□□□□ 0.57
SMN2-216ENST00000638794 RECQL4O94761 1208 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 MUTP22033 750 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 NAMPTP43490 491 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 TRAPPC10P48553 1259 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 GNL2Q13823 731 aaKnown RBP18.61■□□□□ 0.57
SMN2-216ENST00000638794 RTP2Q5QGT7 225 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 ASTLQ6HA08 431 aaPredicted RBP18.61■□□□□ 0.57
SMN2-216ENST00000638794 PRSS55Q6UWB4 352 aaPredicted RBP18.61■□□□□ 0.57
SMN2-216ENST00000638794 C4orf32Q8N8J7 132 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 FAM184AQ8NB25 1140 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 DEPTORQ8TB45 409 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 HASPINQ8TF76 798 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 HDAC7Q8WUI4 952 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 SMG7Q92540 1137 aaKnown RBP18.61■□□□□ 0.57
SMN2-216ENST00000638794 STAMQ92783 540 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 ATOH1Q92858 354 aaPredicted RBP18.61■□□□□ 0.57
SMN2-216ENST00000638794 PLEKHA4Q9H4M7 779 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 POLD4Q9HCU8 107 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 DUSP12Q9UNI6 340 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 DOCK6Q96HP0 2047 aa18.61■□□□□ 0.57
SMN2-216ENST00000638794 ZFHX2Q9C0A1 2572 aaPredicted RBP18.6■□□□□ 0.57
SMN2-216ENST00000638794 KIF4AO95239 1232 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 PAPLNO95428 1278 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 C1RP00736 705 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 GBP2P32456 591 aaPredicted RBP18.6■□□□□ 0.57
SMN2-216ENST00000638794 CCT6AP40227 531 aaKnown RBP18.6■□□□□ 0.57
SMN2-216ENST00000638794 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMN2-216ENST00000638794 CREMQ03060 361 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 PPP2R5AQ15172 486 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 NAB2Q15742 525 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 EEF1DP3Q658K8 133 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 LILRA6Q6PI73 481 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 ZSCAN31Q96LW9 406 aaPredicted RBP18.6■□□□□ 0.57
SMN2-216ENST00000638794 ADPGKQ9BRR6 497 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 IRF2BPLQ9H1B7 796 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 BHMT2Q9H2M3 363 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 IGSF9Q9P2J2 1179 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 LRWD1Q9UFC0 647 aa18.6■□□□□ 0.57
SMN2-216ENST00000638794 NOL7Q9UMY1 257 aaKnown RBP18.6■□□□□ 0.57
SMN2-216ENST00000638794 THP07101 528 aa18.59■□□□□ 0.57
SMN2-216ENST00000638794 CWF19L1Q69YN2 538 aaKnown RBP18.59■□□□□ 0.57
SMN2-216ENST00000638794 MYADMQ96S97 322 aa18.59■□□□□ 0.57
SMN2-216ENST00000638794 KIF2CQ99661 725 aa18.59■□□□□ 0.57
SMN2-216ENST00000638794 NT5C3AQ9H0P0 336 aa18.59■□□□□ 0.57
SMN2-216ENST00000638794 PIDD1Q9HB75 910 aa18.59■□□□□ 0.57
SMN2-216ENST00000638794 SH2B1Q9NRF2 756 aaPredicted RBP18.59■□□□□ 0.57
SMN2-216ENST00000638794 ZDHHC7Q9NXF8 308 aa18.59■□□□□ 0.57
SMN2-216ENST00000638794 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
SMN2-216ENST00000638794 NARSO43776 548 aaKnown RBP18.58■□□□□ 0.56
SMN2-216ENST00000638794 CLCN5P51795 746 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 NT5DC1Q5TFE4 455 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 FLCNQ8NFG4 579 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 RSAD2Q8WXG1 361 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 KIFAP3Q92845 792 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 IFT74Q96LB3 600 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 TTPALQ9BTX7 342 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 PRKD2Q9BZL6 878 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 DDX19AQ9NUU7 478 aaKnown RBP18.58■□□□□ 0.56
SMN2-216ENST00000638794 EPS15L1Q9UBC2 864 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 GDAQ9Y2T3 454 aa18.58■□□□□ 0.56
SMN2-216ENST00000638794 NPR3P17342 541 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 U2AF2P26368 475 aaKnown RBP eCLIP18.57■□□□□ 0.56
SMN2-216ENST00000638794 TOB1P50616 345 aaPredicted RBP18.57■□□□□ 0.56
SMN2-216ENST00000638794 EFNA5P52803 228 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 PTGDRQ13258 359 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 PSMD5Q16401 504 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 DCAF4L1Q3SXM0 396 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms